Protein Alignment ind and Hoxc6

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: XP_006520531.1
• Gene: Hoxc6 / 15425
• MGIID: 96197
• Length: 243
• Species: Mus musculus
• Alignment Length: 213
• Identity: 63/213 - (29%)
• Similarity: 90/213 - (42%)
• Gaps: 25/213 - (11%)

  Fly   109 YAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSAS 173
            |:..|.|.:::..||:..|.|   ...:|...|:...:.|                  |...:..
Mouse    50 YSTPFYSPQENVVFSSSRGPY---DYGSNSFYQEKDMLSN------------------CRQNTLG 93

  Fly   174 SSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITP--LINDYADSSKRIRTAFTS 236
            .:.......:|...||:....:...|....|.....:...|...|  |...|....:|.|..::.
Mouse    94 HNTQTSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSVCFVPGSLGVGYGADRRRGRQIYSR 158

  Fly   237 TQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGS 301
            .|.||||:||..|.||:|.|||||||.|.|:|:|:||||||||:|.||  ..:.|..||....|:
Mouse   159 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK--ESNLTSTLSGGGGGA 221

  Fly   302 PQASPVSPQVKVHELKVE 319
            ...|....:.|..|.:.|
Mouse   222 TADSLGGKEEKREETEEE 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	33/55 (60%)
Hoxc6	XP_006520531.1	Homeodomain	150..206	CDD:459649	33/55 (60%)