DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ind and Hoxb7

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_034590.2 Gene:Hoxb7 / 15415 MGIID:96188 Length:217 Species:Mus musculus


Alignment Length:239 Identity:73/239 - (30%)
Similarity:98/239 - (41%) Gaps:56/239 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 AAAALQQHPHVSS--SPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLY 150
            |.|...::|..||  :||:.....:..|||..:..|:    |..|..|.||:        :..||
Mouse     7 ANALFSKYPAASSVFAPGAFPEQTSCAFASNPQRPGY----GAGPGAPFSAS--------VQGLY 59

  Fly   151 GSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFD-EPQGKRFKHESSCSPNSSPLKNHSSGGPV 214
            .    ||           ...|..||:..|...:. ||.    .....|:|....|.....|.|.
Mouse    60 S----GG-----------GAMAGQSAAGVYAAGYGLEPS----SFNMHCAPFEQNLSGVCPGDPA 105

  Fly   215 E-------------------ITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEI 260
            :                   |.|.:.......||.|..:|..|.||||:||.:|.||:|.|||||
Mouse   106 KAAGAKEQRDSDLAAESNFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEI 170

  Fly   261 ANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGSPQA 304
            |:.|.|:|:|:||||||||:|.||   |:.|....|......:|
Mouse   171 AHTLCLTERQIKIWFQNRRMKWKK---ENKTSGPGTTGQDKAEA 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 32/51 (63%)
Hoxb7NP_034590.2 Antp-type hexapeptide 126..131 2/4 (50%)
Homeobox 141..194 CDD:365835 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..217 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.