DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and Hoxb4

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_034589.3 Gene:Hoxb4 / 15412 MGIID:96185 Length:250 Species:Mus musculus


Alignment Length:256 Identity:83/256 - (32%)
Similarity:101/256 - (39%) Gaps:92/256 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 SPGSLYHPYAQLFASKRKSSGF--------------SNYEGCY--------PSPPLSANPNSQQL 143
            |||.    ||   ..:|:.|||              ..|..|.        |.||....|.....
Mouse    34 SPGY----YA---GGQRRESGFQPEAAFGRRAPCTVQRYAACRDPGPPPPPPPPPPPPPPGLSPR 91

  Fly   144 PPIHNLYGSPVVGGLPLPEPGSF------------CTS----PSASSSASLDYTNNFDEP---QG 189
            .|:     .|..|.| |||||..            |..    ||.|.||.       .||   ..
Mouse    92 APV-----QPTAGAL-LPEPGQRSEAVSSSPPPPPCAQNPLHPSPSHSAC-------KEPVVYPW 143

  Fly   190 KRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSR 254
            .|..|.|:.:|      |::.|.|              ||.|||:|..|:||||:||.:|.||:|
Mouse   144 MRKVHVSTVNP------NYAGGEP--------------KRSRTAYTRQQVLELEKEFHYNRYLTR 188

  Fly   255 LRRIEIANRLRLSEKQVKIWFQNRRVKQKK-----------GGSESPTFNLSTNSNGSPQA 304
            .||:|||:.|.|||:|:||||||||:|.||           ||:...........||.|.|
Mouse   189 RRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGAAGGPPGRPNGGPPA 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 34/51 (67%)
Hoxb4NP_034589.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133 28/111 (25%)
Antp-type hexapeptide 140..145 0/4 (0%)
Homeobox 164..218 CDD:395001 34/53 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..250 6/31 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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