Protein Alignment ind and Hoxb1

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: XP_006532343.1
• Gene: Hoxb1 / 15407
• MGIID: 96182
• Length: 330
• Species: Mus musculus
• Alignment Length: 336
• Identity: 94/336 - (27%)
• Similarity: 132/336 - (39%)
• Gaps: 85/336 - (25%)

  Fly    31 PTAAAAVAAAAMLPSIPMLPYPA--SYVGSYLFSLGIQQQ--QQQQQQQQQHAAAAAAAAAAAAA 91
            |:|.:|..      |.|....||  ||.|...:..|:...  ||......|...::...:..:.|
Mouse    19 PSAYSAPT------SFPPCSAPAVDSYAGESRYGGGLPSSALQQNSGYPVQQPPSSLGVSFPSPA 77

  Fly    92 LQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVG 156
            ...:...:.:|.  |.|      |:..|.|.|..:|.|..|    :....||..:.:.||:..||
Mouse    78 PSGYAPAACNPS--YGP------SQYYSVGQSEGDGSYFHP----SSYGAQLGGLPDSYGAGGVG 130

  Fly   157 GLPLPEP-GSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPL-----------KNHS 209
            ..|.|.| ..:.|..:|:.:::.|..:.         ..||.||...|.|           :|..
Mouse   131 SGPYPPPQPPYGTEQTATFASAYDLLSE---------DKESPCSSEPSTLTPRTFDWMKVKRNPP 186

  Fly   210 SGGPVE---ITPLINDYADSSK-------------------------RIRTAFTSTQLLELEREF 246
            ..|..:   ...|...|.:..:                         .:||.||:.||.|||:||
Mouse   187 KTGRAQRSHFLSLARAYTEGPEPGLHSFLQLLLLAAKVSELGLGAPGGLRTNFTTRQLTELEKEF 251

  Fly   247 SHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK----GG----------SESPTFNLSTN 297
            ..|.||||.||:|||..|.|:|.||||||||||:||||    ||          .|:.......:
Mouse   252 HFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGGRMPAGPPGCPKEAAGDASDQS 316

  Fly   298 SNGSPQASPVS 308
            :..||:|||.|
Mouse   317 ACTSPEASPSS 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	36/80 (45%)
Hoxb1	XP_006532343.1	Homeodomain	236..289	CDD:459649	36/52 (69%)