Protein Alignment ind and Hoxa4

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_032291.1
• Gene: Hoxa4 / 15401
• MGIID: 96176
• Length: 285
• Species: Mus musculus
• Alignment Length: 309
• Identity: 97/309 - (31%)
• Similarity: 118/309 - (38%)
• Gaps: 78/309 - (25%)

  Fly    25 GSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAA 89
            |.|||...|...........|.|.||.|                       ..|||....|..|.
Mouse    27 GGPGGGDGAVGGGPGYPRPQSAPHLPAP-----------------------NPHAARQPPAYYAP 68

  Fly    90 AALQQHPHVSSSPGSLYH------PYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHN 148
            .|.:     .|.||.||.      |||...||..:..         .||...|:|:....||
Mouse    69 RARE-----PSYPGGLYPAPAAACPYACRGASPARPE---------QSPAPGAHPSPAPQPP--- 116

  Fly   149 LYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKR------FKHESSCSPNSSPLKN 207
               :|.....|.|...:..|..||.:...|........|:||.      .|.....:.|||
Mouse   117 ---APPRHCAPGPTTPAVATGGSAPACPLLLADQGPAGPKGKEPVVYPWMKKIHVSAVNSS---- 174

  Fly   208 HSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVK 272
            ::.|.|              ||.|||:|..|:||||:||..|.||:|.||||||:.|.|||:|||
Mouse   175 YNGGEP--------------KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVK 225

  Fly   273 IWFQNRRVKQKKGGSESPTFNLSTNSNGSPQASP-----VSPQVKVHEL 316
            |||||||:|.||......|...|:|:..:|...|     .||....|.|
Mouse   226 IWFQNRRMKWKKDHKLPNTKMRSSNTASAPAGPPGKAQTHSPHPHPHPL 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	36/51 (71%)
Hoxa4	NP_032291.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..70		15/65 (23%)
		Antp-type hexapeptide	159..164		0/4 (0%)
		Homeobox	183..236	CDD:278475	36/52 (69%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	238..285		9/37 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810