Protein Alignment ind and Hoxa3

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_034582.1
• Gene: Hoxa3 / 15400
• MGIID: 96175
• Length: 443
• Species: Mus musculus
• Alignment Length: 267
• Identity: 88/267 - (32%)
• Similarity: 114/267 - (42%)
• Gaps: 55/267 - (20%)

  Fly    84 AAAAAAAALQQHPHVSS----SPGSLYHPYAQLFASKRKSSGFSN----YEGCY------PS-PP 133
            ||...|....|.|:..|    :.|..||..|....|...:.|...    .|.|.      || ||
Mouse    20 AANGFAYNASQQPYAPSAALGTDGVEYHRPACSLQSPASAGGHPKTHELSEACLRTLSGPPSQPP 84

  Fly   134 LSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSC 198
            ....|   .|||      .|.....|.|:|......|.|.:.|:....::...||... .:.:..
Mouse    85 GLGEP---PLPP------PPPQAAPPAPQPPQPPPQPPAPTPAAPPPPSSVSPPQSAN-SNPTPA 139

  Fly   199 SPNSSPLKNHSSGGPVEITPLINDYAD-------------------------SSKRIRTAFTSTQ 238
            |...|||.|..:.|. :|.|.:.:...                         ||||.|||:||.|
Mouse   140 STAKSPLLNSPTVGK-QIFPWMKESRQNTKQKTSGSSSGESCAGDKSPPGQASSKRARTAYTSAQ 203

  Fly   239 LLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNG-SP 302
            |:|||:||..|.||.|.||:|:||.|.|:|:|:||||||||:|.||   :.....:.|:|.| ||
Mouse   204 LVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK---DQKGKGMLTSSGGQSP 265

  Fly   303 QASPVSP 309
            ..|||.|
Mouse   266 SRSPVPP 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	36/55 (65%)
Hoxa3	NP_034582.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	74..151		22/86 (26%)
		Antp-type hexapeptide	156..161		2/4 (50%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	163..197		4/33 (12%)
		COG5576	<182..309	CDD:227863	49/94 (52%)
		Homeodomain	193..249	CDD:459649	36/55 (65%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	248..354		11/28 (39%)
		DUF4074	378..441	CDD:463833
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	401..443