DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and Hoxa10

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_032289.2 Gene:Hoxa10 / 15395 MGIID:96171 Length:416 Species:Mus musculus


Alignment Length:418 Identity:105/418 - (25%)
Similarity:139/418 - (33%) Gaps:145/418 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SRSFLMDSLLSDR------------------------------------------PNLSQKKEKL 24
            :.|||:|||:|..                                          |.|..|:.:.
Mouse    26 ANSFLVDSLISSGRGEAGVGGGSAGGGGGGYYAHGGVYLPPASDLPYGLQSCGLFPALGSKRNEA 90

  Fly    25 GSPGG---------SPTAAAAVAAAAML------------PSIPMLPYPASYVGSYLFSLGIQQQ 68
            .||||         .|.......|...|            |..|..|.|             |.|
Mouse    91 PSPGGGGGGGSGGLGPGTHGYAPAPLDLWLDAPRSCRMEPPDGPPPPQP-------------QPQ 142

  Fly    69 QQQQQ---------QQQQHAAAAAAA--------------------AAAAAALQQHPH------- 97
            |||||         |.|..|.:.:.|                    .:|||.|...|.       
Mouse   143 QQQQQPPPPPPQPPQPQPQATSCSFAQNIKEESSYCLYDAADKCPKGSAAADLAPFPRGPPPDGC 207

  Fly    98 -VSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYP--SPPLSANPNSQQL-PPIHNLYGSPVVGGL 158
             :.:|.|.....|.:|..:...:.||.:..|...  :.|..|.|..:.. ||.....||....|.
Mouse   208 ALGASSGVPVPGYFRLSQAYGTAKGFGSGGGGTQQLASPFPAQPPGRGFDPPPALASGSTEAAGK 272

  Fly   159 -----PLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKH-ESSCSPNSSPLKNHSSGGPVEIT 217
                 ..|.|...||....|              ||....| .||.:...||..:.:|....|..
Mouse   273 ERVLDSTPPPTLVCTGGGGS--------------QGDEEAHASSSAAEELSPAPSENSKASPEKD 323

  Fly   218 PLIND---------YADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKI 273
            .|.:.         .|.|.::.|..:|..|.||||:||..|.||:|.||:||:..:.|:::||||
Mouse   324 SLGSSKGENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKI 388

  Fly   274 WFQNRRVKQKKGGSESPTFNLSTNSNGS 301
            ||||||:|.||...|:....|:.|.|.|
Mouse   389 WFQNRRMKLKKMNRENRIRELTANFNFS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 29/55 (53%)
Hoxa10NP_032289.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..60 0/19 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..167 24/98 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 228..345 28/130 (22%)
Homeodomain 343..399 CDD:459649 29/55 (53%)

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