DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and Dlx3

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_034185.1 Gene:Dlx3 / 13393 MGIID:94903 Length:287 Species:Mus musculus


Alignment Length:215 Identity:57/215 - (26%)
Similarity:86/215 - (40%) Gaps:54/215 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 SPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGK----- 190
            |..||.:..|:..|.:                |.|..|.....|:...||.:.  :|.|:     
Mouse    17 SSSLSCHAGSKDSPTL----------------PESTVTDLGYYSAPQHDYYSG--QPYGQTVNPY 63

  Fly   191 RFKHESSCSPNS-----SPLKNHSSGG-----------------PVEI-------TPLINDYADS 226
            .:.|:.:.:..:     ||...::.||                 ||.:       ..::|.....
Mouse    64 TYHHQFNLNGLAGTGAYSPKSEYTYGGSYRQYGAYREQPLPAQDPVSVKEEPEAEVRMVNGKPKK 128

  Fly   227 SKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK--GGSES 289
            .::.||.::|.||..|:|.|....||:...|.|:|.:|.|::.||||||||||.|.||  ...|.
Mouse   129 VRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEV 193

  Fly   290 PTFNLSTNSNGSPQASPVSP 309
            |..:...||:.....||.||
Mouse   194 PLEHSPNNSDSMACNSPPSP 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 26/55 (47%)
Dlx3NP_034185.1 DLL_N 27..107 CDD:463567 14/97 (14%)
COG5576 <109..224 CDD:227863 38/105 (36%)
Homeodomain 130..186 CDD:459649 26/55 (47%)
Interaction with DNA. /evidence=ECO:0000250|UniProtKB:O60479 131..181 23/49 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..287 6/19 (32%)

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