Protein Alignment ind and Cdx4

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_031700.1
• Gene: Cdx4 / 12592
• MGIID: 88362
• Length: 282
• Species: Mus musculus
• Alignment Length: 302
• Identity: 80/302 - (26%)
• Similarity: 123/302 - (40%)
• Gaps: 82/302 - (27%)

  Fly    24 LGSPGGSPTAAAAVAAAAMLP-------SIPMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAA 81
            |.|||||.||....:..:..|       :.|:.|:   |||
Mouse    18 LRSPGGSSTAGVGTSGGSGSPLPASNFTAAPVYPH---YVG------------------------ 55

  Fly    82 AAAAAAAAAALQQHPHVSS------SPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNS 140
                         :||:|:      |.|:...||:.      ....:|.    ||.|     |::
Mouse    56 -------------YPHMSNMDPHGPSLGAWSSPYSP------PREDWST----YPGP-----PST 92

  Fly   141 QQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPL 205
            ....|:::: .|||.|.   |:..:...:..||:..||.     |.........:|..|..:||.
Mouse    93 MGTVPMNDM-TSPVFGS---PDYSTLGPTSGASNGGSLP-----DAASESLVSLDSGTSGATSPS 148

  Fly   206 KN-HSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEK 269
            :: ||....:..|..:.....:.::.|..:|..|.||||:||..|.|::..|:.|:|..|.|||:
Mouse   149 RSRHSPYAWMRKTVQVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSER 213

  Fly   270 QVKIWFQNRRVKQKKGGSESPTFNLSTNSNGSPQ--ASPVSP 309
            ||||||||||.|::|  ......:...|:.||.|  :..:||
Mouse   214 QVKIWFQNRRAKERK--MIKKKISQFENTGGSVQSDSGSISP 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	29/55 (53%)
Cdx4	NP_031700.1	Caudal_act	13..168	CDD:461413	44/213 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	13..36		8/17 (47%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	98..156		16/66 (24%)
		Homeodomain	173..228	CDD:459649	29/54 (54%)