DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and Barx2

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_038828.2 Gene:Barx2 / 12023 MGIID:109617 Length:283 Species:Mus musculus


Alignment Length:266 Identity:73/266 - (27%)
Similarity:105/266 - (39%) Gaps:86/266 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 HPHVS---SSPGSLYHPYAQLFASKRKSSGF-----------------SNYEGCYPSPPLSANPN 139
            |.|..   ||||       ||.|::|:...|                 |.|..|   |.|...|.
Mouse     2 HCHAELRLSSPG-------QLKAARRRYKTFMIDEILSKETCDYFEKLSLYSVC---PSLVVRPK 56

  Fly   140 SQQLPPIHNLYGSPVVGGLPL-----PEP---------GSFCT-----SPSASSSASLDYTNNFD 185
                 |:|:..|||.:...||     .:|         ||..|     .|.|::.|:....   :
Mouse    57 -----PLHSCTGSPSLRAYPLLSVITRQPTVISHLVPTGSGLTPVLTRHPVAAAEAAAAAA---E 113

  Fly   186 EPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNA 250
            .|.|:......|.:...:|.:.                  ..:|.||.||..||:.||::|....
Mouse   114 TPGGEALASSESETEQPTPRQK------------------KPRRSRTIFTELQLMGLEKKFQKQK 160

  Fly   251 YLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQK----KGGSESPTFNLSTNSNGSPQAS--PVSP 309
            |||...|:::|..|.|::.|||.|:||||:|.|    |||.|:|     |...|.|:.:  |.|.
Mouse   161 YLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAP-----TKPKGRPKKNSIPTSE 220

  Fly   310 QVKVHE 315
            :::..|
Mouse   221 EIEAEE 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 27/59 (46%)
Barx2NP_038828.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..141 6/54 (11%)
Homeodomain 138..194 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..283 11/34 (32%)

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