Protein Alignment ind and hoxc10

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001258236.1
• Gene: hoxc10 / 100487723
• XenbaseID: XB-GENE-486915
• Length: 351
• Species: Xenopus tropicalis
• Alignment Length: 372
• Identity: 94/372 - (25%)
• Similarity: 140/372 - (37%)
• Gaps: 109/372 - (29%)

  Fly     4 SFLMDSLL-SDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSI--------PML---PYPASYV 56
            |||||||. |.|.......:.:....||..:...:....::||:        |.|   .||
 Frog    11 SFLMDSLAGSCRGETYSTNQGMYMQTGSDFSCGMMRNCGIVPSLSKRDDVNNPGLSLNTYP---- 71

  Fly    57 GSYLFSLGIQQQQQQQQQQQQHAA-------------------------AAAAAAAAAAALQQHP 96
             |||..|....:.:...:.:|..|                         .|..|..||....|.|
 Frog    72 -SYLSQLDSWCEPKNTYRIEQPVARQLSSCSFPTNVKEENVCCMYSTDKRAKNATEAALYPNQMP 135

  Fly    97 HVSSS----PGSLYHPYAQLFASKRKSS---------GFSNY-----------------EGCYPS 131
            ...||    |...|:..:|.::.::..|         .|.|.                 :|.:|.
 Frog   136 ETRSSDHEVPVPSYYRASQGYSMEKTPSCHTTGDFETTFENRTSVSARSEILEQQQAGGKGGFPE 200

  Fly   132 PPLSANPNSQQLPPIHNLYGSPVVG-------GLPLPE--PGSFCTSPSASSSASLDYTNNFDEP 187
               :...::|.|..  ||..|....       .||.|:  |......||.::..|   |:|.|..
 Frog   201 ---NTKTDNQSLAT--NLTTSSATASDIKTEKSLPAPKLPPSEGDKEPSKNTDTS---TDNSDAE 257

  Fly   188 QGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYL 252
            ..:..|.|            :::|..:.        |.|.::.|..:|..|.||||:||..|.||
 Frog   258 AKEDIKAE------------NAAGNWLT--------AKSGRKKRCPYTKHQTLELEKEFLFNMYL 302

  Fly   253 SRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSN 299
            :|.||:||:..:.|:::||||||||||:|.||...|:....|::|.|
 Frog   303 TRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRENRIRELTSNFN 349

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	29/55 (53%)
hoxc10	NP_001258236.1	Homeodomain	278..334	CDD:459649	29/55 (53%)