DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and gbx2.1

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_002932046.1 Gene:gbx2.1 / 100485559 XenbaseID:XB-GENE-855771 Length:340 Species:Xenopus tropicalis


Alignment Length:356 Identity:98/356 - (27%)
Similarity:133/356 - (37%) Gaps:95/356 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SRSFLMDSLLSDRPN--------------LSQKKEKLGSPGGSPTAAAAVAAAAMLPS------I 46
            |.:|.:|||:...|.              :..:...|..|...|.:.:.......|||      |
 Frog    19 STAFSIDSLIGSPPQPSPGHFVYTGYPMFMPYRPVVLPPPPPPPPSLSQATLQPTLPSAHPHHQI 83

  Fly    47 PMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQ 111
            |.||      ..:..||.        |.....:...|......:|..||...:...|:     ..
 Frog    84 PSLP------SGFCSSLA--------QGMALTSTLMATLPGGFSASAQHQEAARKFGA-----QS 129

  Fly   112 LFASKRKSSG-----------FSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGS 165
            |..:..||.|           :...||..  .|.||:..|  |.|:.         |....|.|.
 Frog   130 LQGAFEKSDGGQSDGEDGNKTYITKEGTL--LPFSASEVS--LGPVR---------GQGKEESGK 181

  Fly   166 FCTSPSASSS----ASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADS 226
            .........|    :.|||::  |:....:..|:...:|..||..::.|.         |....|
 Frog   182 EAEGKGKEDSYLMDSDLDYSS--DDNISCQTAHKEDDTPEESPPNSNPSN---------NSNTSS 235

  Fly   227 ---SKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK---G 285
               ::|.||||||.||||||:||....|||...|.:||:.|:|||.||||||||||.|.|:   |
 Frog   236 TGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAG 300

  Fly   286 GSESPTFNLSTNSNGSPQASP--VSPQVKVH 314
            .:.|.|        |.|..:|  |.| :.||
 Frog   301 NANSKT--------GEPSRNPKIVVP-IPVH 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 35/51 (69%)
gbx2.1XP_002932046.1 Homeobox 242..296 CDD:365835 35/53 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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