Protein Alignment ind and nkx6-2

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: XP_002937836.1
• Gene: nkx6-2 / 100038084
• XenbaseID: XB-GENE-484527
• Length: 281
• Species: Xenopus tropicalis
• Alignment Length: 254
• Identity: 67/254 - (26%)
• Similarity: 94/254 - (37%)
• Gaps: 63/254 - (24%)

  Fly    98 VSSSPGSLYH----------PYAQLFASKRKSSGFSNYEGCYP-----------SPPLSANPNSQ 141
            :||:|.:..|          ||| |.....|:.|.|:.....|           |.||.|...|.
 Frog    17 LSSTPLAALHNMAEMKTTLFPYA-LQNPSFKAPGLSSLSAQIPLGTPHGISDILSRPLGATLGSS 80

  Fly   142 QLPPIHNLYGS-PVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSP----- 200
            .     ||..| |.:.||.......|  :|:|.|.    |.....|..|:        :|
 Frog    81 A-----NLLSSLPRINGLATSTGMYF--NPAAVSR----YPKPLAELPGR--------APIFWPG 126

  Fly   201 --NSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANR 263
              ..||.::...|.|.: ..::.|.....|..|..|:..|:..||:.|....||:...|..:|..
 Frog   127 VMQGSPWRDPRLGCPSQ-AGMVLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYS 190

  Fly   264 LRLSEKQVKIWFQNRRVK------------QKKGGSESPTFNLST-NSNGSPQASPVSP 309
            |.::|.|||:||||||.|            :||..||:.....|: |........|:.|
 Frog   191 LGMTESQVKVWFQNRRTKWRKRHAAEMATAKKKHDSETEKMKESSENEEDDEYNKPLDP 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	23/67 (34%)
nkx6-2	XP_002937836.1	Homeodomain	153..211	CDD:459649	23/57 (40%)