Protein Alignment Rpn12R and rpn-12

DIOPT Version :9

• Sequence 1: NP_996086.1
• Gene: Rpn12R / 2768973
• FlyBaseID: FBgn0036465
• Length: 262
• Species: Drosophila melanogaster
• Sequence 2: NP_496489.1
• Gene: rpn-12 / 174786
• WormBaseID: WBGene00004468
• Length: 250
• Species: Caenorhabditis elegans
• Alignment Length: 263
• Identity: 80/263 - (30%)
• Similarity: 145/263 - (55%)
• Gaps: 14/263 - (5%)

  Fly     1 MSNLYTELKNEWSKHAPNLTHCSRLLDGFKLELVRSNFGTIQTASSSKQKDQLIKSREMLEIAVE 65
            ||..:..|...|:|...:|....:.|:    ||.:    .:..:|....|...:.|:::.||:|.
 Worm     1 MSAAHKNLLAVWAKEPKDLVAVEKALN----ELTK----VLSASSDLNDKQSALASKDLYEISVL 57

  Fly    66 HSITIKDYAAFERYMAQLNTYYYDYDKYLESSKHMYKFMGLNLLYMLATNRLADFHIELERLPTA 130
            .:|...|:..|:.|:.|::||   |....|:|::.:...||:|:::||.|||:|||:.||::|..
 Worm    58 LAILKHDFETFDDYINQMHTY---YTMAPENSENKHLMTGLHLMFLLAANRLSDFHMLLEQIPQK 119

  Fly   131 LLLHDSFIQPVLALENYYMEGRYNKILQAKKSMPSEIYSNFMDILVNTAREEIASCMEKSYLKMA 195
            ....:::|...:.:|...|||.|||::..:|::||..|:.|:.|:::|.|.|||:.:|||:..:.
 Worm   120 EQTSNAYISTPVRIEQSLMEGAYNKVVLTEKNIPSPFYTIFIRIMLDTIRREIATSIEKSFKVLT 184

  Fly   196 PKLAAQRLGLRPGSKELFELATKRQWCLD-EEGNYDYAGLHTRPMEKVPAKDIATHNLTYAQELE 259
            .|.|...| |....:::.:...:|:|.|| |...::......:|: .:....:||..|.||::||
 Worm   185 AKDATVML-LFDNDEQMKKFGQERKWHLDGERYVFEIEVAQEKPV-NLDTVRVATQTLFYAKQLE 247

  Fly   260 KIV 262
            :||
 Worm   248 QIV 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn12R	NP_996086.1	CSN8_PSD8_EIF3K	98..228	CDD:287089	45/130 (35%)
rpn-12	NP_496489.1	CSN8_PSD8_EIF3K	87..218	CDD:287089	45/131 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160158442
Domainoid	1	1.000	97	1.000	Domainoid score	I4543
eggNOG	1	0.900	-	-		E1_KOG3151
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	139	1.000	Inparanoid score	I3080
Isobase	1	0.950	-	0	Normalized mean entropy	S2152
OMA	1	1.010	-	-		QHG53806
OrthoDB	1	1.010	-	-		D1183195at2759
OrthoFinder	1	1.000	-	-		FOG0003512
OrthoInspector	1	1.000	-	-		otm14733
orthoMCL	1	0.900	-	-		OOG6_102164
Panther	1	1.100	-	-	O	PTHR12387
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1201
SonicParanoid	1	1.000	-	-		X2884
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	16	15.790