DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33288 and Rcc1l

DIOPT Version :10

Sequence 1:NP_996136.2 Gene:CG33288 / 2768968 FlyBaseID:FBgn0053288 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_291050.1 Gene:Rcc1l / 94254 MGIID:2137600 Length:461 Species:Mus musculus


Alignment Length:269 Identity:59/269 - (21%)
Similarity:95/269 - (35%) Gaps:72/269 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KSHLAENTQSYFYIKNDPVKRLISGPNQSAVICESGRLFVWGENHYGQLGIGGH---------GG 69
            :||.....|.:    :..|.:::.|.:.|..:.:.|.::..|....||.|:|.:         ||
Mouse   215 ESHKVHRMQDF----DGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGG 275

  Fly    70 ------------------ASGKKGGGSHNGNGDI-----VTKPTCVKALKTLGL----KICDVAF 107
                              |....||....||.:.     ||..|.|...:.|..    |:..||.
Mouse   276 DLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVAC 340

  Fly   108 GNHWAVMLTHSNEIFFTGRNIFPEDTHVAQHFTSAQVDQQPCAIIRKPFRLEEFDDYLSKNEETD 172
            |.....:|.....:|..|..|..:...:.:   :|..:..|..:    |.|.||:..:..::   
Mouse   341 GGTGCAVLNAEGHVFVWGYGILGKGPKLLE---TAIPEMIPPTL----FGLTEFNPEVQVSQ--- 395

  Fly   173 NFMTVQAGKEHFAVLTTTGRLIGCGSNAQ--LQLGELEADY-------DGHPVEIRLDAPVQQFT 228
                ::.|..|||.||..|.|...|.|.:  |.:|.||..|       .|.||::         .
Mouse   396 ----IRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPVDV---------A 447

  Fly   229 CGPESTLVL 237
            ||.:..:.|
Mouse   448 CGVDHMVTL 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33288NP_996136.2 ATS1 <30..244 CDD:444065 56/253 (22%)
Rcc1lNP_291050.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35
ATS1 52..434 CDD:444065 53/236 (22%)
RCC1 1. /evidence=ECO:0000255 55..121
RCC1 2. /evidence=ECO:0000255 125..188
RCC1 3. /evidence=ECO:0000255 190..244 6/32 (19%)
RCC1 4. /evidence=ECO:0000255 245..297 9/51 (18%)
RCC1 5. /evidence=ECO:0000255 298..350 14/51 (27%)
RCC1 6. /evidence=ECO:0000255 352..408 14/69 (20%)
RCC1 7. /evidence=ECO:0000255 409..458 15/57 (26%)
Blue background indicates that the domain is not in the aligned region.

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