DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33288 and SRM1

DIOPT Version :9

Sequence 1:NP_996136.2 Gene:CG33288 / 2768968 FlyBaseID:FBgn0053288 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_011418.1 Gene:SRM1 / 852782 SGDID:S000003065 Length:482 Species:Saccharomyces cerevisiae


Alignment Length:260 Identity:61/260 - (23%)
Similarity:97/260 - (37%) Gaps:61/260 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GAIFTLG---KSHLAENTQSYFYIKN-DP-------VKRLISGPNQSAVICESGRLFVWGENHYG 60
            |.:|..|   ::.|.......|.:|. ||       ||.:.||.|....:.:..:|..||.|.:|
Yeast   240 GMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFG 304

  Fly    61 QLGIGGHGGASGKKGGGSHNGNGDIVTKPTCVKALKTLGLK----ICDVAFGNHWAVMLTHSNEI 121
            |.|:            .....:|.:||||      |.|.|.    |..:|.|.|.:::|:...::
Yeast   305 QCGV------------SEDVEDGALVTKP------KRLALPDNVVIRSIAAGEHHSLILSQDGDL 351

  Fly   122 FFTGR-NIF----PEDTHVAQHFTSAQVDQQPCAIIRKPFRLEEFDDYLSKNEETDNFMTVQAGK 181
            :..|| ::|    |:|.  ...:|...|..:..|:   |..        :|......|.:|.||.
Yeast   352 YSCGRLDMFEVGIPKDN--LPEYTYKDVHGKARAV---PLP--------TKLNNVPKFKSVAAGS 403

  Fly   182 EHFAVLTTTGRLI--GCGSNAQLQLGELEADYDGHPVEIRLDAPVQQFTCGPESTLVLTATGNLF 244
            .|...:...|...  |.|....:.||..|.|.:   |..|:     :.|...:..::|...|..|
Yeast   404 HHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTE---VPTRI-----KNTATQDHNIILVGCGGQF 460

  Fly   245  244
            Yeast   461  460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33288NP_996136.2 ATS1 5..>260 CDD:227511 61/260 (23%)
SRM1NP_011418.1 ATS1 15..477 CDD:227511 61/260 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45982
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.960

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