Protein Alignment CG33288 and Rpgr

DIOPT Version :9

• Sequence 1: NP_996136.2
• Gene: CG33288 / 2768968
• FlyBaseID: FBgn0053288
• Length: 1115
• Species: Drosophila melanogaster
• Sequence 2: XP_038955861.1
• Gene: Rpgr / 367733
• RGDID: 1560136
• Length: 1380
• Species: Rattus norvegicus
• Alignment Length: 1201
• Identity: 246/1201 - (20%)
• Similarity: 398/1201 - (33%)
• Gaps: 363/1201 - (30%)

  Fly     3 IPASGAIFTLGKSHLAENTQSYFYIKNDPVKRLISGPNQSAVICESGRLFVWGENHYGQLGIGGH 67
            :|.:||:||.||:..|||..|.|:.|||....|..|...:|::..:.:|:::|.|::||||:|..
  Rat    46 VPDTGAVFTFGKTKFAENIPSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSK 110

  Fly    68 GGASGKKGGGSHNGNGDIVTKPTCVKALKTLGLKICDVAFGNHWAVMLTHSNEIFFTGRN----- 127
            ..                ::||||:||||...:|:  .|.|.:..::.|.:..::..|.|
  Rat   111 SA----------------ISKPTCIKALKPEKVKL--AACGRNHTLVSTDTGGVYAAGGNNEGQL 157

  Fly   128 ----IFPEDT-HVAQHFTSAQVDQQPCAIIRKPFRLEEFDDYLSKNEETDNFMTVQAGKEHFAVL 187
                ....|| |....||.:.:.:|                             :.||....|.|
  Rat   158 GLGDTDDRDTFHQIGFFTPSDIIKQ-----------------------------LSAGANTSAAL 193

  Fly   188 TTTGRLIGCGSNAQLQLGELEADYDGHPVEIRLDAPVQQFTCGPESTLVLTATGNLFLTGHLNE- 251
            |..|:|...|.|::.|:|.........|.|:.:..|:...:||...:..:|..|.|:..|....
  Rat   194 TEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWISCGYYHSAFVTTDGELYTFGEPENG 258

  Fly   252 --------FVFPRFTELQKNLPP---------------TEAIIF-------------MHISKTSE 280
                    .:..|..:....:|.               ||.:::             ..:.:|||
  Rat   259 KLGLPNQLLINHRSPQRVLGIPDKVIQVACGGGHTVVLTEKVVYAFGLGQFGQLGLGTFLFETSE 323

  Fly   281 VYIVTNAGSIYRSFESLRNKSLVFQRFYDYDCEEN----------------GPIWKLLKGFSFYA 329
            ..|:.            |.|.   |:.....|.||                |...||..|...:
  Rat   324 PKIID------------RIKD---QKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENF- 372

  Fly   330 VLSKANKFFTTFSESGHHLKTFREISKFKNLRLLDIAVGDQHVLVQGIPR--------------- 379
                .|:||.|.            .|.|....:..||.|..|:||...||
  Rat   373 ----TNQFFPTL------------CSNFLKFTVQLIACGGCHMLVFATPRLGTIDETEFEEVYEP 421

  Fly   380 -SSMSSASVNGSAEPNRYVNRSFVLQPTDANGNKEDTRTHSGRSLIKQEGMEETEDLSMSTTVGE 443
             .|..|.|:| ...|...:|||...:..    .:|..|.....|::..  :...|..|.||:...
  Rat   422 YMSTGSLSIN-DLSPGSSLNRSLSARLR----RRERERPSCSASMVGT--LPPLEGTSASTSASY 479

  Fly   444 LAAAA-----------GAGTAAAMEAV-----KHLINGEKPEEKSDLTRYQDLNANIESADIIPK 492
            .:.::           ...|:.:.|.:     :..:|.|...|.|...   ||....|:.||:..
  Rat   480 FSPSSIPFRLSVNNYPEKSTSDSTEPLDSDYFEDKMNKETETENSSAV---DLENFGETIDILNM 541

  Fly   493 EHKEAKGSDEIGPNSNISEKEEDNQIADRV---TPGNKNESAADQEKSVHSPNTAATSEAIKTND 554
            .|.....|:|...:.:..:|:::....::|   ||..:||.:.:.|:          ...||...
  Rat   542 THMMTTSSNEKSLDFSPIQKQQNQDTVEKVVESTPYTENEDSYEYEE----------MSKIKEGT 596

  Fly   555 GYKE--MKPSATIESPVI--TADTKESSLKPIVSPVKTKRSPAKTIESSIKSSSSPVKPTESMQK 615
            .||:  .|....|.:|.|  |...:|.               ..:::.....:.:.|| :|.:.|
  Rat   597 VYKQYLAKGIFMIRAPEILGTFSDEEG---------------GNSLDQEELQAFTGVK-SEQVGK 645

  Fly   616 LPTPPTHTPTPPNSPTESLRSNKSAHDMELVDPKPKVPGSQETLLRPRTPYPESSNSSTPQTIKK 680
                         ...|.:.|.|....||:.|.| ||..|||             ||.:......
  Rat   646 -------------ERDEEIDSEKKTQAMEMADLK-KVRESQE-------------NSKSDTFFDD 683

  Fly   681 TPIRNFSYESAMDHDHLER-----------TSPELV------------SSLDTVEEVPTAKIHVN 722
            .|.::.:.||..:.|..|.           :..|||            |..|:.||....|: |.
  Rat   684 LPDKDMNSESEDNKDIAEERKSSEQNMVFDSETELVEEPDSYMECKKHSEQDSAEESEQHKL-VE 747

  Fly   723 TPTPPTEDDE-----HLAVEITTTKDSTDSSKVINEIRFINDGVDVTSRVEEQMPDTPLE-SSVE 781
            :.....:|||     :|.......:.:|:     ||:| .|..:.......:.:...|.| ...|
  Rat   748 SSIEEKDDDEVETEHYLWYSRKCAEQATE-----NELR-ANRFLPKYDLKHDHLSGIPEEQEGAE 806

  Fly   782 DLESD--GEQKMQRGEEQVDKIVTSSEEAVSKVGEDAIDVMDSTRNSIQTAVKNAANGARDAMEA 844
            |.|..  .||::|..||.:: :....|||.::...|.|     |...:     :.:.|     |:
  Rat   807 DAEGSVVVEQEVQAQEENME-LEGDREEAKAEALSDVI-----TEKEV-----SESEG-----ES 855

  Fly   845 VGERMATGARGAVDTVGGAVGA-------------AGKGAHRLASDAMHAVEQVGSSAMHAVEQA 896
            ||:..:.|.||.: ...|::|.             .|||..      .|.::..|.......|:.
  Rat   856 VGDSGSEGERGQI-REKGSLGVQQWQRVQEKQERRKGKGKQ------SHILDMEGKGEDEGWEKG 913

  Fly   897 GSNAVKAASE--TKDSMGRAMDSVTSKISTEVLGAKENISSLFQIKAAREADPQTTPCSTPRGED 959
            |....|....  .::...:.|:.                         |||.            |
  Rat   914 GEGGEKMERNEGNREERNQEMEE-------------------------REAG------------D 941

  Fly   960 DLSFKEGAPKTTTTLGSNEEDERTTASVNSNHNSAGHGNGNGNIFEPSTTFE-DPLDAVVERSKK 1023
            :.|.||...|.....|..||:|...    ......|...|.|...|.|...| |..:....|.:|
  Rat   942 EGSEKEDEEKEEEEEGEEEEEEENP----EEKGEEGQEEGEGTSEEQSREEEGDRQEKEGGREEK 1002

  Fly  1024 AMQDDIRAM-QLRANSHIQAVAQQKEEDAKG 1053
            ..|:|.:.. :|.....|:...::.|.:.:|
  Rat  1003 EGQEDEKEREELEREEEIEEGEEEGEGEEEG 1033

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG33288	NP_996136.2	ATS1	5..>260	CDD:227511	66/273 (24%)
Rpgr	XP_038955861.1	ATS1	<78..368	CDD:227511	68/351 (19%)
		RCC1	352..398	CDD:395335	13/62 (21%)
		MDN1	<625..904	CDD:227596	70/336 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900