DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33288 and CG9135

DIOPT Version :9

Sequence 1:NP_996136.2 Gene:CG33288 / 2768968 FlyBaseID:FBgn0053288 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster


Alignment Length:605 Identity:110/605 - (18%)
Similarity:180/605 - (29%) Gaps:249/605 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NTQSYFYIKNDPVKRLISGPN--QSAVICESGRLFVWGENHYGQLGIGGHGGASGKKGGGSHNGN 82
            |..|:.....:..:.:.|||:  .:.:|....:...:|.|..||||:                 :
  Fly   104 NLYSFHRFTEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGL-----------------S 151

  Fly    83 GDI--VTKPTCVKALKTLGLKICDVAFGNHWAVMLTHSNEIFFTGRNIFPEDTHVAQHFTSAQVD 145
            .||  ..|||.:.||:.|                                               
  Fly   152 QDIKLAEKPTIIPALEQL----------------------------------------------- 169

  Fly   146 QQPCAIIRKPFRLEEFDDYLSKNEETDNFMTVQAGKEHFAVLTTTGRLIGCGSN--AQLQLGELE 208
                                       |.:....|:.|...||.||.:..||.|  .|..:|...
  Fly   170 ---------------------------NIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTH 207

  Fly   209 AD-YDGHPVEIRLDAPVQQFTCGPESTLVLTATGNLFLTGHLNEFVFPRFTELQKNLPPTEAIIF 272
            |: |...|:..| ..|:.:..||.|.:::|.      :.|.|:.|..|.:.:|..|   |:|..|
  Fly   208 ANIYSPTPINYR-GPPIIRIGCGAEFSVILD------IKGSLHTFGLPEYGQLGHN---TDAKYF 262

  Fly   273 MHISKTSEVYIVTNAGSIYRSFESLRNKSLVFQRFYDYDCEENGPIWKLLKGFSFYAVLSKANKF 337
            :            ||..:...||:...|.:::                          :.|    
  Fly   263 V------------NANKLSFHFETSPKKVVLY--------------------------IEK---- 285

  Fly   338 FTTFSESGHHLKTFREISKFKNLRLLDIAVGDQHVLV------------QGIPRSSMSSASVNGS 390
                |:.||       ::....::::|.|.|:.|.:.            .|..|.        |.
  Fly   286 ----SKEGH-------VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRL--------GH 331

  Fly   391 AEP-NRYVNR--SFVLQPTDANGNKEDTRTHSGRSLIKQEGMEETEDLSMSTTVGELAAAAGAGT 452
            ||| :..|.|  .|.           ||:...|||:....        :.|..|.||...     
  Fly   332 AEPKDEMVPRLMKFF-----------DTQGRGGRSVFCGS--------TFSLIVNELGLL----- 372

  Fly   453 AAAMEAVKHLINGEKPEEKSDLTRYQDLNANIESADIIPKEHKEAKGSD--EIG-PNSNISEKEE 514
                     .:.|:              |.....|::.||..::..|.:  :|| .|::|....:
  Fly   373 ---------FLFGQ--------------NKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISAD 414

  Fly   515 DNQIADRVTPGNKNESAADQEKSVHSPNTAATSEAIKTNDGYKEMKPSATI--ESPVITADTKES 577
            |..||...:|........:.:||...|......:.||.        |..|:  ...|:..||...
  Fly   415 DTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKI--------PQVTMGYSHTVLLVDTTHE 471

  Fly   578 SLKPIVSPVKTKRSPAKTIE 597
            :.|.     |.::.|..||:
  Fly   472 ATKQ-----KYEKMPEYTID 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33288NP_996136.2 ATS1 5..>260 CDD:227511 45/246 (18%)
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 17/135 (13%)
RCC1_2 171..200 CDD:290274 9/28 (32%)
RCC1 188..236 CDD:278826 14/48 (29%)
RCC1 239..312 CDD:278826 22/128 (17%)
RCC1 317..366 CDD:278826 15/75 (20%)
RCC1 414..465 CDD:278826 12/58 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442612
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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