Sequence 1: | NP_996136.2 | Gene: | CG33288 / 2768968 | FlyBaseID: | FBgn0053288 | Length: | 1115 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009301513.1 | Gene: | herc1 / 336598 | ZFINID: | ZDB-GENE-030131-8542 | Length: | 4867 | Species: | Danio rerio |
Alignment Length: | 1294 | Identity: | 260/1294 - (20%) |
---|---|---|---|
Similarity: | 416/1294 - (32%) | Gaps: | 442/1294 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ASGAIFTLGK------SHLAENTQSYFYIKNDPVKRLISGPNQ-------------SAVICESGR 50
Fly 51 LFVWGENHYGQLGIG------------------------GHGGASGKKG------GGSHN---GN 82
Fly 83 GDI--VTKPTCVKALKTLGLKICDVAFGNHWAVMLTHSNEIFFTGRNIFPEDTHVAQHFTSAQVD 145
Fly 146 QQPC----------AIIRKPFRLEEFDDYLSKNEETDNFMTVQAGKEHFAVLTTTGRLIGCGSNA 200
Fly 201 QLQLGELEADYDGH---PVE-----IRLD-APVQQFTCGPESTLVLTATGNLFLTGHLNEFVFPR 256
Fly 257 FTELQKNLPPTEAIIFMHISKTSEVYIVTNAGSIYRSFESLRNKSLVFQRFYDYDCEENGPI--- 318
Fly 319 --------WKL-LKGFSFYAVLSKANKFFTTFSESGHHLKTFREISKFKNL--RLLDIAVGDQHV 372
Fly 373 LVQGIPRSSMSSASVNGSAEPNRYVNRSFVLQPTDANGNKEDTRTHSGRSLIKQ---------EG 428
Fly 429 MEETEDLSMSTTVGELAAAAGAGTAAAMEAVKHLINGEKPEEKSDLTR----YQDLNANIESADI 489
Fly 490 IPKE-------------HKEAKGSDEIGPNSNISEKEEDNQI----------------ADRVTPG 525
Fly 526 NKNESAADQEKSVHSP------NTAATSEAIKTNDGYKEMKPSATIESPVITADTKESSLKPIVS 584
Fly 585 -----PVKTKRSPAKTIESSIKSSSSPVKPTESMQKLPTPPTHTPTPPNSPTESLRSNKSAH-DM 643
Fly 644 ELVDPKPKVPGSQET---------------------LLRPRTPYPESSNSSTPQTIKKTPIRNFS 687
Fly 688 YESAMDHDHLERTSPELVSSLDTVEEVPTAKIHVNTPTP-PTEDDEHLAVEIT--TTKDSTDSSK 749
Fly 750 VINEIRFINDGVDVTSRVEEQMPDTPLESSVEDL--------ESDGEQKMQRGEEQVDKIVTSSE 806
Fly 807 EAVSKVGEDAIDVMDSTRNSIQTAVKNAANGARDAMEAVGERMATGARGAVDTVGGAVGAAGKGA 871
Fly 872 HRLASDAMHAVEQVGSSAMHAVEQAGSNAVKAASETKDSMGRAMDSVTSKISTEVLGAKENISSL 936
Fly 937 FQ-IKAAREADPQTTPCSTPRGED-----DLSFKEGAPKTTTTLGSNEEDERTTASVNSNHNSAG 995
Fly 996 HGNGNGNIFEPSTTFEDPLDAVVERSKKAMQDDIRAMQLRANS-----HI--QAVAQQKEEDAKG 1053
Fly 1054 FV----------KQVMDRLSCRNEKAVRIEDELRPPAG-----SHNKNTNKVNSELSLT 1097 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG33288 | NP_996136.2 | ATS1 | 5..>260 | CDD:227511 | 71/327 (22%) |
herc1 | XP_009301513.1 | RCC1 | 369..726 | CDD:332518 | 68/302 (23%) |
SPRY_HERC1 | 2004..2161 | CDD:293939 | |||
UBA_HERC1 | 2729..2772 | CDD:270584 | |||
WD40 | 3406..3773 | CDD:330360 | |||
WD40 repeat | 3419..3452 | CDD:293791 | |||
WD40 repeat | 3479..3514 | CDD:293791 | |||
WD40 repeat | 3527..3569 | CDD:293791 | |||
WD40 repeat | 3575..3611 | CDD:293791 | |||
WD40 repeat | 3618..3660 | CDD:293791 | |||
WD40 repeat | 3665..3710 | CDD:293791 | |||
WD40 | 3737..>3831 | CDD:330360 | |||
WD40 repeat | 3749..3784 | CDD:293791 | |||
RCC1 | 4004..4351 | CDD:332518 | |||
HECTc | 4479..4847 | CDD:238033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |