DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33288 and CG7420

DIOPT Version :9

Sequence 1:NP_996136.2 Gene:CG33288 / 2768968 FlyBaseID:FBgn0053288 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster


Alignment Length:541 Identity:96/541 - (17%)
Similarity:163/541 - (30%) Gaps:220/541 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LFVWGENHYGQLGIGGHGGASGKKGGGSHNGNGDIVTKPTCVKALKTLGLKICDVAFGNHWAVML 115
            ::.||.|.:||||:|                                                  
  Fly     3 VYAWGANSHGQLGLG-------------------------------------------------- 17

  Fly   116 THSNEIFFTGRNIFPEDTHVAQHFTSAQVDQQPCAIIRKPFRLEEFDDYLSKNEETDNFMTVQAG 180
             ..:|:..|.:.:      ....|..|||            ||                  ::.|
  Fly    18 -FESELCMTPQRV------AKCSFAPAQV------------RL------------------IRGG 45

  Fly   181 KEHFAVLTTTGRLIGCGSNAQLQLG-----ELEADYDGHPVEIRLDAPVQQFTCGPESTLVLTAT 240
            ..|..:|.|:||:..||.|.:.|||     |..:::...|.|...|.||:..:||.:.:..:|.|
  Fly    46 GGHVLILDTSGRIHACGWNNRGQLGLDSTEECHSEFKMIPTEYFGDVPVETISCGWDISGAITLT 110

  Fly   241 GNLFLTGHLNEFVFPRFTELQKNLPPTEAIIFMHISKTSEVYIVTNAGSIYRSFESLRNKSLVFQ 305
            ..||:.|. |.|                                ...|...|.|.::|....|  
  Fly   111 KRLFVWGS-NAF--------------------------------QQLGICQRGFTAVRRPMPV-- 140

  Fly   306 RFYDYDCEENGPIWKLLKGFSFYAVLSKANKFFT---------------TFSESGHHLKTFR-EI 354
                 ......|..::..|....|||::.||.:.               ..:...|...|.: ::
  Fly   141 -----KLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKIQV 200

  Fly   355 SKFKNLRLLDIAVGDQHVLVQGIPRSSMSSASVNGSAEPNRYV----NRSFVLQPTDANGNKEDT 415
            .....||::.|:.|..|::::      .:..|..|.....|.:    |:   ...::|...:||.
  Fly   201 HNPNELRIVSISSGQNHMVLK------CADLSETGGGSTKRILTLGDNK---FGQSNAFQFEEDV 256

  Fly   416 R------THSGRSLIKQEGMEETEDLSMSTTVGELAAAAGAGTAAAMEAVKHLINGEKPEEKSDL 474
            |      ||:...|...|.:     :......|:|    |.|:.:..:|:...:..:.||::   
  Fly   257 RQLAVGWTHNAAVLKNNEIL-----VWGRNCYGQL----GMGSFSEQQAIPTPLRLKLPEDQ--- 309

  Fly   475 TRYQDLNANIESADIIPKEHKEAKGSDEIGPNSNISEKEEDNQIADRVTPG-------NKNESAA 532
                                         || :.|....|...:  |.|.|       |::.:..
  Fly   310 -----------------------------GP-ARIHMGAEHGLL--RTTAGEVYTWGWNEHGNCG 342

  Fly   533 DQEKSVHSPN--TAATSEAIK 551
            :.......||  |.||||.::
  Fly   343 NNSTENLHPNSFTTATSEIVR 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33288NP_996136.2 ATS1 5..>260 CDD:227511 43/213 (20%)
CG7420NP_001259871.1 RCC1 2..52 CDD:278826 18/135 (13%)
RCC1 55..107 CDD:278826 16/51 (31%)
RCC1 112..161 CDD:278826 13/88 (15%)
RCC1_2 256..285 CDD:290274 5/33 (15%)
RCC1 274..320 CDD:278826 11/87 (13%)
RCC1 328..>348 CDD:278826 2/19 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442616
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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