Sequence 1: | NP_996136.2 | Gene: | CG33288 / 2768968 | FlyBaseID: | FBgn0053288 | Length: | 1115 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
Alignment Length: | 886 | Identity: | 175/886 - (19%) |
---|---|---|---|
Similarity: | 278/886 - (31%) | Gaps: | 312/886 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 SGAIFTLGKSHLAENTQSYFYIKND----------------------------PVKR-------- 34
Fly 35 LISGPNQSAVICESGRLFVWGENHYGQLGIGGHGGASGKKGGGSHNGNGDIVTKPTCVKALKTLG 99
Fly 100 LKICDVAFGNHWAVMLTHSNEIFFTGRNIFPEDTH----------VAQHFTSAQVDQQPCAIIRK 154
Fly 155 PFRLEEFDDYLSKNEETDNFMTVQAGKEHFAVLTTTGRLI--GCGSNAQLQLGELEADYDGHPVE 217
Fly 218 IRLDAPVQQFTCGPESTLVLTATGNL--------FLTGHLNEFVFPRFTELQKNLPPTEAIIFMH 274
Fly 275 ISKTSEV------------------YIVTNAGSIYRSFESLRNKSLVFQRFYDYDCEENGPIWKL 321
Fly 322 LKGFSFYAVLSKANKFFTTFSESGHHLKTFREISKFKNLRL-LD------IAVGDQHVLVQGIPR 379
Fly 380 SSMSSASVNGSAEPNRYVNRSFVLQPTDANGNKEDTRTHSGRSLIKQEGM----EETEDLSMSTT 440
Fly 441 VGELAAAAGAGTAAAMEAVKHLINGEKPEEKSDLTRYQDLNANIESADIIPKEHKEAKGSDEIGP 505
Fly 506 NSNISEKEEDN-----------QIADRVTPGNKNESAADQEKSVHSPNTAATSEAIKTNDGYKEM 559
Fly 560 KPSATIESPVITADTKESSLKPI-VSPVKTKRSPAKTIESSIKSSSSPVKPTESMQKLPTPPTHT 623
Fly 624 PTPPNSPTESLRSNKS-AHDME-----LVDPKPKVPGSQETLLR----PRTPYPESSNSSTPQTI 678
Fly 679 KKTPIRNFSYESAMDHDHLERTSPELVSSLDTVEEVPTAKIHV--NTPTPPTEDDEHLAVE-ITT 740
Fly 741 TK--------------DSTDSSKVINEIRFINDGVDVTSRV 767 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG33288 | NP_996136.2 | ATS1 | 5..>260 | CDD:227511 | 62/309 (20%) |
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | 6/50 (12%) | ||
RCC1 | 3091..3140 | CDD:278826 | 21/66 (32%) | ||
RCC1 | 3144..3194 | CDD:278826 | 8/77 (10%) | ||
RCC1 | 3197..3246 | CDD:278826 | 13/48 (27%) | ||
RCC1 | 3250..3298 | CDD:278826 | 5/68 (7%) | ||
RCC1 | 3302..3350 | CDD:278826 | 16/93 (17%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |