DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33288 and RCC1

DIOPT Version :9

Sequence 1:NP_996136.2 Gene:CG33288 / 2768968 FlyBaseID:FBgn0053288 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_001041659.1 Gene:RCC1 / 1104 HGNCID:1913 Length:452 Species:Homo sapiens


Alignment Length:444 Identity:95/444 - (21%)
Similarity:149/444 - (33%) Gaps:123/444 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DPVKRLISGPNQSAVICESGRLFVWGENHYGQLGIGGHGGASGKKGGGSHNGNGDIVTKPTCVKA 94
            |...|.:|..:.|.   |.|.:...|:...||||:|.:  ...:|             ||    |
Human    50 DQKTRPVSHRSHST---EPGLVLTLGQGDVGQLGLGEN--VMERK-------------KP----A 92

  Fly    95 LKTLGLKICDVAFGNHWAVMLTHSNEIFFTGRN---IFPEDTHVAQHFTSAQVDQQPCAIIRKPF 156
            |.::...:.....|....|.|:.|.:::..|.|   ....||.|                     
Human    93 LVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSV--------------------- 136

  Fly   157 RLEEFDDYLSKNEETDNFMTVQAGKEHFAVLTTTGRLIGCGS--NAQLQLGELEADYDGH-PVEI 218
              |..:....|.|..:..:.|.||..|.|.||..||:...||  :....:|.||...... ||::
Human   137 --EGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV 199

  Fly   219 RLDAPVQQFTCGPESTLVLTATGNLFLTGHLNEFVFPRFTELQKNLPPTEAIIFMHISKTSEVYI 283
            :||.||.:...|.:..::|||.|:|:..|...:....|..||..|....:.:..:.:.|...:..
Human   200 QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKS 264

  Fly   284 VTNAGSIYRSFESLRNKSLVFQRFYDYDC--------EENGPIWKLLKGFSFYAVLSKANKFFTT 340
            ..:.|.:               ||.|..|        ...|.::    ||.    ||..::..|.
Human   265 RGSRGHV---------------RFQDAFCGAYFTFAISHEGHVY----GFG----LSNYHQLGTP 306

  Fly   341 FSES---GHHLKTFREISKFKNLRLLDIAVGDQHVLVQGIPRSSMSSASVNGSAEPNRYVNRSFV 402
            .:||   ..:|.:|:..:|    ..:..:.|..|.:..    .|...|...|.||..|       
Human   307 GTESCFIPQNLTSFKNSTK----SWVGFSGGQHHTVCM----DSEGKAYSLGRAEYGR------- 356

  Fly   403 LQPTDANGNKEDTRTHSGRSLIKQEGMEETEDLSMSTTVGELAAAAGAGTAAAM 456
                                |...||.||.   |:.|.:..|.|.:.....|::
Human   357 --------------------LGLGEGAEEK---SIPTLISRLPAVSSVACGASV 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33288NP_996136.2 ATS1 5..>260 CDD:227511 57/235 (24%)
RCC1NP_001041659.1 RCC1 66..113 CDD:278826 14/65 (22%)
RCC1 116..165 CDD:278826 14/71 (20%)
RCC1 168..218 CDD:278826 14/49 (29%)
RCC1 221..286 CDD:278826 13/79 (16%)
RCC1 289..340 CDD:278826 13/62 (21%)
RCC1 343..386 CDD:278826 14/72 (19%)
RCC1 394..445 CDD:278826
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45982
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.870

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