DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33288 and Rcc1

DIOPT Version :10

Sequence 1:NP_996136.2 Gene:CG33288 / 2768968 FlyBaseID:FBgn0053288 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_001184011.1 Gene:Rcc1 / 100088 MGIID:1913989 Length:434 Species:Mus musculus


Alignment Length:223 Identity:56/223 - (25%)
Similarity:82/223 - (36%) Gaps:48/223 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 ESGRLFVWGENHYGQLGIGGHGGASGKKGGGSHNGNGDIVTKPTCVKALKTLGLKICDVAFGNHW 111
            |.|.:...|:...||||:|  .....:|             ||..|..|:    .:.....|...
Mouse    46 EPGLVLTLGQGDVGQLGLG--ESVLERK-------------KPALVPLLQ----DVVQAEAGGMH 91

  Fly   112 AVMLTHSNEIFFTGRN---IFPEDTHVAQHFTSAQVDQQPCAIIRKPFRLEEFDDYLSKNEETDN 173
            .|.|:.|.:::..|.|   ....||.|                       |..:....|.|..:.
Mouse    92 TVCLSQSGQVYSFGCNDEGALGRDTSV-----------------------EGSEMVPGKVELQEK 133

  Fly   174 FMTVQAGKEHFAVLTTTGRLIGCGS--NAQLQLGELEADYDGH-PVEIRLDAPVQQFTCGPESTL 235
            .:.|.||..|.|.||..||:...||  :....:|.||...... ||:::|||||.:...|.:..:
Mouse   134 VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLV 198

  Fly   236 VLTATGNLFLTGHLNEFVFPRFTELQKN 263
            :||..|:|:..|...:....|..||..|
Mouse   199 MLTNDGDLYTLGCGEQGQLGRVPELFAN 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33288NP_996136.2 ATS1 <30..244 CDD:444065 50/202 (25%)
Rcc1NP_001184011.1 ATS1 45..402 CDD:444065 56/223 (25%)

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