DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AsnS and Asnsd1

DIOPT Version :9

Sequence 1:NP_996132.1 Gene:AsnS / 2768965 FlyBaseID:FBgn0270926 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001100233.1 Gene:Asnsd1 / 299507 RGDID:1306332 Length:627 Species:Rattus norvegicus


Alignment Length:630 Identity:138/630 - (21%)
Similarity:212/630 - (33%) Gaps:205/630 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCGIFAIFSRDGEPIPTQILHGSKHSLRELAYRQSGKHRHRGPDSTGVYVNSLEGVAMIHER--L 63
            ||||....|...|       |.||....:|.|..    |.|||.|:...:.|......:...  |
  Rat     1 MCGICCSVSFSVE-------HFSKDLKEDLLYNL----RRRGPSSSRQLLKSAVNYQCLFSGHVL 54

  Fly    64 RIIGVEMGDQPFVSEDGNLILVANGEIYNYLELSAEIAKKRGSYNPMSDCHVILELYQDYGKDLL 128
            .:.|| :..||...|.||:.| .|||::|.:::.||....:..::.:|.|....|:...:.|   
  Rat    55 HLRGV-LTAQPVEDECGNVFL-WNGEVFNGVQVEAEDNDTQVMFSSLSACKNESEILSLFSK--- 114

  Fly   129 QYITGMFAFALYDRKTKEVLLARDPFGIIPMY--------------VGEDASG------------ 167
              :.|.::|..|...:..:...||.||...:.              ||...||            
  Rat   115 --VHGPWSFIYYQASSHCLWFGRDVFGRRSLLWQFSNLGKSFCLSSVGAQISGGADQWQEVPASG 177

  Fly   168 ----NLWVASEMKCLV---------------DTCSKVETFTPGE-ARFGKVGDFKTCWQFQQ--- 209
                :|..|:..:|::               :.|:...|.||.| ..|..|...|......:   
  Rat   178 IFQIDLNSAAVSRCVILKLYPWKSISKENVAEECANELTQTPAELPEFVSVVINKANLYLSKPIV 242

  Fly   210 ---SWIKEVPTQT-CELS------------LLRAN------------LEFAVRSHLQC------- 239
               ..:.|||.:| |..|            |||..            |..||:....|       
  Rat   243 PLNKTLPEVPLETQCRNSSSVPGSRETLEILLRDEHTQRIVQQFIDVLSVAVKRRTLCLAREENL 307

  Fly   240 ---DV--------QMGALLSGGVDSSLIASIATKIM----------------------------- 264
               ||        .:..|.||||||.:||::|.:.:                             
  Rat   308 ASKDVLKTCGKKANIAILFSGGVDSMVIAALADRHIPLDEPIDLLNVAFLPKQKAGLPIPNVERN 372

  Fly   265 ---------RERDPNFRLKTFSVGLRDA--PDFQAARSVAKYIDS-------DHKEIIFEIDEAL 311
                     .|..|:..:..   |..||  ||....::..|.:.|       :..||...::|..
  Rat   373 QQNHCEIPPEESSPSTAVPQ---GPHDAEVPDRVTGKAGLKELQSVNPARTWNFVEINVSLEELQ 434

  Fly   312 DGIRDIIYHL----ETYDVTTVRCSLPMLLLARYIKSTGI----------------KMILSGEGA 356
            ...|..|.||    :|....::.|::       :..|.||                |:||:|.||
  Rat   435 KLRRARICHLVQPSDTVLDDSIGCAV-------WFASRGIGWLVTEDAVQSYKSSAKVILTGIGA 492

  Fly   357 DEIFGGYLYFHKAP----SYNDFHEELVKRVRQLHLSDCLRANKVAMAKGVELRVPFLDTGFVNH 417
            ||...||.. |:|.    .....:||:...:.::...:..|.::|....|.|.|.||||...|:.
  Rat   493 DEQLAGYSR-HRARFQSLGLEGLNEEIAMELGRISSRNLGRDDRVIADHGKEARFPFLDENVVSF 556

  Fly   418 VMQIRPEDKIPGPLNK-FGEVQQKRLEKYVLRAAFADNYLPDEVL 461
            :..:...:|:...|.: .|       ||.:||.|..:..|....|
  Rat   557 LNSLPVWEKVDLALPRGVG-------EKLILRLAAVELGLSSSAL 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsnSNP_996132.1 asnB 1..554 CDD:236513 138/630 (22%)
AsnB 2..>182 CDD:238364 49/226 (22%)
Asn_synthase 225..528 CDD:279122 73/339 (22%)
Asnsd1NP_001100233.1 AsnB 1..608 CDD:223444 138/630 (22%)
Gn_AT_II_novel 1..179 CDD:239735 47/195 (24%)
Asn_Synthase_B_C 322..603 CDD:238949 65/291 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0367
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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