DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7369 and rasgef1bb

DIOPT Version :10

Sequence 1:NP_649415.2 Gene:CG7369 / 2768961 FlyBaseID:FBgn0037188 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001003479.1 Gene:rasgef1bb / 445085 ZFINID:ZDB-GENE-040801-220 Length:475 Species:Danio rerio


Alignment Length:622 Identity:233/622 - (37%)
Similarity:327/622 - (52%) Gaps:162/622 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 TTSITHKTLPDLKTQRSNSACHAHESLSALRRIALLEKPPEKLLSYGAAQSRILGQEAREDFLVY 112
            ||..:.|..|.     :.|:.|:|            .:|.|:  :||.              |.|
Zfish     4 TTPYSSKFNPS-----AYSSSHSH------------RQPVEE--NYGG--------------LHY 35

  Fly   113 SEGRLHSGPLQSLIAHMVPTHEYYPDEGFIFAFLLSARLFVRPHELLAQISQTWEHQQQDVGTGG 177
            .:.:|.||.|::||..:|||.:||||..:||.||||:|||:.|.||::::..        :|...
Zfish    36 RDNKLVSGSLEALIQLLVPTVDYYPDRSYIFTFLLSSRLFLNPFELMSRVCY--------LGVDH 92

  Fly   178 DVVDDAGQGPGRTMMVSINSASPLTQRKGSAAAASHSSELEPRLQQRTNTQRSAQHCIRLLSEWI 242
            ..|.|                 |...:|       ...::.|::             ::||:||.
Zfish    93 HRVGD-----------------PQMDKK-------RIRDIAPKI-------------VQLLTEWT 120

  Fly   243 EIFPYDFRDERLMQQVRILARKCVYIDNSLGKQVSRILQLLVSRLTTLEQYEEFLQTISSEEA-- 305
            |.|||||||||:|:.::.:..:..:.|....:.:.|::|.|:.:||||.||||.|.|.|:..|  
Zfish   121 ETFPYDFRDERMMRSLKEMTHRLAFGDELSRRAMQRLIQRLLRKLTTLGQYEESLATTSAAAAID 185

  Fly   306 -----QSQQQQHHHHHGHHNHLHNAFQTFLGSSSHANGASGGGGSASGTSNSSSSGHTSSASTSN 365
                 :|:||                                                       
Zfish   186 RPVALKSKQQ------------------------------------------------------- 195

  Fly   366 SISTTPQPDDVFGIMDMCPSCAHLAHQLTAIELERLSHIGPEEFVQAFAKDYQQQAKDGSREANN 430
                ..:.||.  ::::|......|.|||.||:||||:|||||||:|||:         .|.::|
Zfish   196 ----LVRRDDC--VLNLCDDPFIFAQQLTHIEMERLSYIGPEEFVRAFAQ---------KRPSDN 245

  Fly   431 SKCSGGGGGSLNDMKKTRNLESYVQWFNRLSYLTASEIVKYPKKKQRVRIIEYWIETARECFNIG 495
            .|       |....:|..|||:||:||||||||||:||....|||.|.|::|::|:.|:||||||
Zfish   246 HK-------SFFSKRKASNLEAYVEWFNRLSYLTATEICMPVKKKHRARVLEFFIDVAQECFNIG 303

  Fly   496 NFNSLMAIIAGLNLAPIGRLKKTWAKVQSAKFSVLEHQMDPTSNFNSYRSTLKAAMWRSEGATEE 560
            |||||||||.|:|:.|:.||||||.||.:.||.:|.|||||:|||.|||:.|:.|..||..|...
Zfish   304 NFNSLMAIITGMNMNPVSRLKKTWGKVNTDKFDILVHQMDPSSNFYSYRTALRGATQRSSTAHTS 368

  Fly   561 RERIIIPFFSLFVKDLYFLNEGCSNRLPNNHINFEKCSQLAKQVMEFNEWKKVNCPFERLPNVIA 625
            :|.|:|||||||:||:|||||||:|||.|.||||||..:|||||.||..|::|.|||||....:.
Zfish   369 QEMIVIPFFSLFIKDIYFLNEGCANRLSNGHINFEKFWELAKQVSEFLSWRQVICPFERDRKTLQ 433

  Fly   626 YLQNSAVLNENTLSMASFECEPPENTEEKDRYRTVKA 662
            ||.::.|.:|:.|.:||:|.|.|||..|:|..|::::
Zfish   434 YLISAPVFSEDELQLASYESEGPENNLERDTRRSLRS 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7369NP_649415.2 REM 122..284 CDD:100121 46/161 (29%)
RasGEF 388..597 CDD:459872 122/208 (59%)
rasgef1bbNP_001003479.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 7/37 (19%)
REM 44..168 CDD:100121 49/168 (29%)
RasGEF 213..406 CDD:459872 123/208 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 452..475 8/19 (42%)

Return to query results.
Submit another query.