DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7369 and Rasgef1c

DIOPT Version :9

Sequence 1:NP_649415.2 Gene:CG7369 / 2768961 FlyBaseID:FBgn0037188 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001101743.1 Gene:Rasgef1c / 360519 RGDID:1311549 Length:466 Species:Rattus norvegicus


Alignment Length:561 Identity:213/561 - (37%)
Similarity:298/561 - (53%) Gaps:126/561 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 GQEAREDFLVYSEGRLHSGPLQSLIAHMVPTHEYYPDEGFIFAFLLSARLFVRPHELLAQISQTW 166
            |::|.:..|   :|...|..|::||.|:|||.:|||::.:||.||||:|||:.|.||||::....
  Rat    26 GEQAGQPLL---DGAPSSASLETLIQHLVPTADYYPEKAYIFTFLLSSRLFIEPRELLARVCHLC 87

  Fly   167 EHQQQDVGTGGDVVDDAGQGPGRTMMVSINSASPLTQRKGSAAAASHSSELEPRLQQRTNTQRSA 231
            ..|||                                             |:..:..:...::..
  Rat    88 IEQQQ---------------------------------------------LDKPVLDKARVRKFG 107

  Fly   232 QHCIRLLSEWIEIFPYDFRDERLMQQVRILARKCVYIDNSLGKQVSRILQLLVSRLTTLEQYEEF 296
            ...::||:||.|.||.||.:|..:..:..:..:....|.:.|.::.::||.|..:|.:|.|..| 
  Rat   108 AKLLQLLAEWTETFPRDFEEESTIGHLTDVVGRISPCDETYGNRMHQLLQTLHQKLASLGQGPE- 171

  Fly   297 LQTISSEEAQSQQQQHHHHHGHHNHLHNAFQTFLGSSSHANGASGGGGSASGTSNSSSSGHTSSA 361
                                                     |..|.....|..:...:|.|..  
  Rat   172 -----------------------------------------GLVGADKPISYRTKPPASIHRE-- 193

  Fly   362 STSNSISTTPQPDDVFGIMDMCPSCAHLAHQLTAIELERLSHIGPEEFVQAFAKDYQQQAKDGSR 426
                             ::.:|.....||.|||.:|||||.|||||||||||.            
  Rat   194 -----------------LLGVCSDPYTLAQQLTHVELERLRHIGPEEFVQAFV------------ 229

  Fly   427 EANNSKCSGGGGGSLNDMKKTRNLESYVQWFNRLSYLTASEIVKYPKKKQRVRIIEYWIETAREC 491
               |.....|.....||  ||.|:|:||:|||||.||.|:||....|||||.::||::|:.||||
  Rat   230 ---NKDPLAGTKPRFND--KTNNVEAYVKWFNRLCYLVATEICMPAKKKQRAQVIEFFIDVAREC 289

  Fly   492 FNIGNFNSLMAIIAGLNLAPIGRLKKTWAKVQSAKFSVLEHQMDPTSNFNSYRSTLKAAMWRSEG 556
            |||||||||||||:|:|::|:.|||||||||::|||.:||||||||.||.:||:.|:.|..||..
  Rat   290 FNIGNFNSLMAIISGMNMSPVSRLKKTWAKVKTAKFFILEHQMDPTGNFCNYRTALRGAAHRSLT 354

  Fly   557 ATEERERIIIPFFSLFVKDLYFLNEGCSNRLPNNHINFEKCSQLAKQVMEFNEWKKVNCPFERLP 621
            |...||:|:||||||.:||:|||||||:|||||.|:||||..:|||||.||..||:|.||||:.|
  Rat   355 AHSSREKIVIPFFSLLIKDIYFLNEGCANRLPNGHVNFEKFLELAKQVGEFITWKQVECPFEQDP 419

  Fly   622 NVIAYLQNSAVLNENTLSMASFECEPPENTEEKDRYRTVKA 662
            ::..||..:.:.:|:.|.:||:|.|.|||..||:|::::::
  Rat   420 SITHYLYTAPIFSEDGLYLASYESESPENQTEKERWKSLRS 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7369NP_649415.2 RasGEF_N 116..261 CDD:279012 39/144 (27%)
RasGEF 388..649 CDD:214539 149/260 (57%)
Rasgef1cNP_001101743.1 REM 42..163 CDD:100121 43/165 (26%)
RasGEF 200..447 CDD:214539 149/263 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 261 1.000 Domainoid score I1890
eggNOG 1 0.900 - - E1_KOG3541
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 437 1.000 Inparanoid score I1631
OMA 1 1.010 - - QHG57431
OrthoDB 1 1.010 - - D246323at33208
OrthoFinder 1 1.000 - - FOG0001827
OrthoInspector 1 1.000 - - otm45996
orthoMCL 1 0.900 - - OOG6_104212
Panther 1 1.100 - - LDO PTHR23113
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1189
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

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