DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7369 and PDZ-GEF

DIOPT Version :10

Sequence 1:NP_649415.2 Gene:CG7369 / 2768961 FlyBaseID:FBgn0037188 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_609012.2 Gene:PDZ-GEF / 33881 FlyBaseID:FBgn0265778 Length:1573 Species:Drosophila melanogaster


Alignment Length:975 Identity:195/975 - (20%)
Similarity:312/975 - (32%) Gaps:396/975 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SNGGLSSATNGRSGSTGSATINLNLKGHERTIVGVPG------------TGASSATTTSITHKTL 56
            |.||..:.:.|..||...|:.:||:|.....|.|.|.            |..:......:||:..
  Fly   253 SIGGAGTDSAGSGGSATGASASLNMKRGHVVIRGTPERLLQQLVEENSMTDPTYVEDFLLTHRIF 317

  Fly    57 PDLKTQRSNSACH--------AHESLSALRRI-----------------------------ALLE 84
            .....:.::...|        ||::.....|:                             ||||
  Fly   318 IQNPQEVTSKLLHWFDLEQVDAHKTQELRDRVTRVVLLWVNNHFTDFEADYEMMEFLEVFEALLE 382

  Fly    85 KPPEKLLSY-------GAAQSRI----LGQEAREDFLVYSEGRLHSG-PLQSL------------ 125
            :  :||||.       .||::|:    |.:.:|::.|.:   |:..| .|:.:            
  Fly   383 R--KKLLSQLRLLHIACAAKARMRSCTLTRSSRDEPLNF---RIVGGYELRGVAIATGNAAVGIY 442

  Fly   126 IAHMVP--------------THEYYPDEGFIFAFLLSAR------------LFVRPHEL-LAQIS 163
            |:|:.|              .||.   .|.....:.|.|            :.|:.:.| ..:|.
  Fly   443 ISHVEPGSKAQDVGLKRGDQIHEV---NGQSLDHVTSKRALEILTGTTHLSISVKSNLLGFKEIM 504

  Fly   164 QTWEHQQQDVGTGGDVVDDAGQGPGRTMMVSINSASPLTQRKGSAAAASHSSELEPRLQQRTNTQ 228
            |..||       ||..   ||.|     .:|..|.|..:.|......|:..::|..|....|:..
  Fly   505 QALEH-------GGGT---AGSG-----SISAGSGSFKSVRSPRRICANDIAKLHGRSDSTTDEL 554

  Fly   229 RSAQ-----HCIRLLSEWIEIFPYDFRDERLMQQVRILARKCVYIDNSLGKQVSRILQLLVSRLT 288
            .|..     |.:||.|.           :.|:.|......:...:..| |...|..:|       
  Fly   555 SSVSASNRAHMVRLSSV-----------DMLLDQPDCAPPQTPPVSGS-GNMASNFMQ------- 600

  Fly   289 TLEQYEEFLQTISSEEAQ-------SQQQQ------------------------HHHHHGHHNHL 322
                  :.||::::..|:       |.||.                        :..:||  :.|
  Fly   601 ------QLLQSVNNSSAKKSGGNSNSDQQDTKGGFMTLAPKRRLQKALAKMNLLNKQNHG--SSL 657

  Fly   323 HNAFQTFL---------------GSSSHANG--ASGGGGSASGTSN-----------SSSSGH-- 357
            :::..|.|               .:.|..||  .||||......||           |.:.|:  
  Fly   658 NDSSDTLLNDPKSKLSAVSSCSSSTQSSINGCTVSGGGRLYQSQSNPDLTSLNYDGGSDAGGNGG 722

  Fly   358 --------------TSSASTSNSISTTPQ-----PDDVFGIMDMCPSCAHL-------AHQLTAI 396
                          .|:|||..:.||...     ||.|..:.....:|.::       ||::..:
  Fly   723 GRLQVNYLNAHIHRPSAASTLTTNSTQSHLLPDYPDHVLKVYKADQTCKYVLIYKETTAHEVVML 787

  Fly   397 ELERLS-------------HIGPEEFVQ---------------AFAKDYQQQAKDGS-------- 425
            .|:...             .:|....|:               :||..|..:..|.:        
  Fly   788 TLQEFGIHDPSSNFSLCEVSVGDGGMVKQRRLPDQLQNLAERISFAARYYLKLNDSTEPLVPDEL 852

  Fly   426 -----REAN------NS-----KCSGGGGGSLNDMKKTRNLES---------------------Y 453
                 ||:|      |:     :.      :|.|....|.:||                     :
  Fly   853 ALELVRESNVHFLHLNAYELAIQL------TLQDFANFRQIESTEYVDELFELRSRYGVPMLSKF 911

  Fly   454 VQWFNRLSYLTASEIVKYPKKKQRVRIIEYWIETARECFNIGNFNSLMAIIAGLNLAPIGRLKKT 518
            .:..||..:...|||.......:|::|::.:|:.||.|....||||:.||::||....:.||::|
  Fly   912 AELVNREMFWVVSEICAEHNIVRRMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQT 976

  Fly   519 WAKVQS---AKFSVLEHQMDPTSNFNSYRSTLKAAMWRSEGATEERERIIIPFFSLFVKDLYFLN 580
            |.|:.|   ..|:.|:..|||:.|.:.||..:.|.:.        .:..||||:.:..|||.|::
  Fly   977 WEKLPSKYQRLFNDLQDLMDPSRNMSKYRQLVSAELL--------AQHPIIPFYPIVKKDLTFIH 1033

  Fly   581 EGCSNRLPNNHINFEKCSQLAKQV----------------MEFNEWKKVNCPFE----------- 618
            .|...|: :..|||||...|||:|                :|.......|..|.           
  Fly  1034 LGNDTRV-DGLINFEKLRMLAKEVRLLTHMCSSPYDLLSILELKGQSPSNALFSLNQMSASQSNA 1097

  Fly   619 ----------------------RLPN-------------VIAYLQNSAVL-NENTLSMASFECEP 647
                                  ..||             |.|||.:..:| :|:.|...|.||||
  Fly  1098 AAGTVIAANAGQATIKRRKKSTAAPNPKKMFEEAQMVRRVKAYLNSLKILSDEDLLHKFSLECEP 1162

  Fly   648  647
              Fly  1163  1162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7369NP_649415.2 REM 122..284 CDD:100121 39/205 (19%)
RasGEF 388..597 CDD:459872 66/291 (23%)
PDZ-GEFNP_609012.2 CAP_ED 128..237 CDD:237999
RasGEFN 279..400 CDD:214571 19/122 (16%)
PDZ_RapGEF2_RapGEF6-like 404..496 CDD:467237 15/97 (15%)
RA_PDZ-GEF1 759..841 CDD:340483 10/81 (12%)
RasGEF 871..1050 CDD:459872 54/193 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.