DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7369 and C3G

DIOPT Version :9

Sequence 1:NP_649415.2 Gene:CG7369 / 2768961 FlyBaseID:FBgn0037188 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster


Alignment Length:688 Identity:144/688 - (20%)
Similarity:246/688 - (35%) Gaps:239/688 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TNGRSGSTG-----SATINLNLKGHERTIVGVPGTGASSATTTSITHKTLPDLKTQRSNSA---- 67
            |.|.:||||     .||:...|..             :.|:..::.....|.|.:..:.||    
  Fly  1026 TLGENGSTGRPDSRMATVCEELND-------------AVASEDAMPEPRSPVLDSNENVSAVDDG 1077

  Fly    68 ----CHAHESLSALRRIA---------------LLEKPPEKLLSYGAAQSRIL------------ 101
                ||:|:..:|...::               :||:..|.     .|:||.|            
  Fly  1078 QTFYCHSHQLPAAEMEMSEDASSADNQPITTPQVLEEQEEP-----TAESRPLVAVHESVKPANV 1137

  Fly   102 --GQEA-REDFLV------------YSEGRLHSGP------LQSLIAHMVPTHEYYPDEGFIFAF 145
              .:|| |.|.|:            ..:.|...||      :.:||.|.....: ..|..|..||
  Fly  1138 DEDEEAERADMLINMLEEVNITRYLILKKREEDGPEVKGGYIDALIVHASRVQK-VADNAFCEAF 1201

  Fly   146 LLSARLFVRPHELLAQISQTWEH---QQQDVGTGGDVVDDAGQGPGRTMMVSINSASPLTQRKGS 207
            :.:.|.|::|.:::.:::..:.:   |.||                                   
  Fly  1202 ITTFRTFIQPIDVIEKLTHRYTYFFCQVQD----------------------------------- 1231

  Fly   208 AAAASHSSELEPRLQQRTNTQRSAQHCIRLLSEWIEIFPYDFRDERLMQQVRILARKCVYIDNSL 272
                              |.|::|:....||...:.    |.....|..|:..|..:.||     
  Fly  1232 ------------------NKQKAAKETFALLVRVVN----DLTSTDLTSQLLSLLVEFVY----- 1269

  Fly   273 GKQVSRILQLLVSRLTTLEQYEEFLQTISSEEAQSQQQQHHHHHGHHNHLHNAFQTFLGSSSHAN 337
              |:....||.:::|..    .:|::.::..:....       :|           |:|.     
  Fly  1270 --QLVCSGQLYLAKLLR----NKFVEKVTLYKEPKV-------YG-----------FVGE----- 1305

  Fly   338 GASGGGGSASGTSNSSSSGHTSSASTSNSISTTPQPDDVFGIMDMCPSCAHLAHQLTAIELERLS 402
              .||.||..|...:.|.|.:.:|...|      ||    .::|:  ....:|.|:|.::.|..:
  Fly  1306 --LGGAGSVGGAGIAGSGGCSGTAGGGN------QP----SLLDL--KSLEIAEQMTLLDAELFT 1356

  Fly   403 HIG-PEEFVQAFAKDYQQQAKDGSREANNSKCSGGGGGSLNDMKKTRNLESYVQWFNRLSYLTAS 466
            .|. ||  |..||||               :|.          :|:.||..:.:.||::||...|
  Fly  1357 KIEIPE--VLLFAKD---------------QCE----------EKSPNLNKFTEHFNKMSYWARS 1394

  Fly   467 EIVKYPKKKQRVRIIEYWIETARECFNIGNFNSLMAIIAGLNLAPIGRLKKTWAK-----VQSAK 526
            :|::....|:|.:.:..:|:..:....:.|:||.:|:::.|:..||.||:  |.|     |:|  
  Fly  1395 KILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLE--WQKGITEEVRS-- 1455

  Fly   527 FSVLEHQMDPTSNFNSYRSTLKAAMWRSEGATEERERIIIPFFSLFVKDLYFLNEGCSNRLPNNH 591
            |..|   :|.:|:|.:||..|           .|.....||:..|.::||.|::.|..:.|....
  Fly  1456 FCAL---IDSSSSFRAYRQAL-----------AETNPPCIPYIGLILQDLTFVHVGNQDYLSKGV 1506

  Fly   592 INFEKCSQLAKQVMEFNEWKKVNCPFERLPNVIAYLQN 629
            |||.|..|....:.....:||...||.|...:|.:..|
  Fly  1507 INFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFFDN 1544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7369NP_649415.2 RasGEF_N 116..261 CDD:279012 24/153 (16%)
RasGEF 388..649 CDD:214539 67/248 (27%)
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 34/229 (15%)
RasGEF 1335..1558 CDD:238087 68/257 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467904
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.