DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7369 and efc25

DIOPT Version :9

Sequence 1:NP_649415.2 Gene:CG7369 / 2768961 FlyBaseID:FBgn0037188 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_596123.1 Gene:efc25 / 2540248 PomBaseID:SPBC336.03 Length:987 Species:Schizosaccharomyces pombe


Alignment Length:569 Identity:108/569 - (18%)
Similarity:210/569 - (36%) Gaps:173/569 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 LSYGAAQSRILGQEAREDFLVYSEGRLHSGPLQSLIAHMVPTHEYYPDEGFIFAFLLSARLFVRP 155
            |...:.||.::......:.:|.|:..:..|.|.:|:.::|  ...:.::.|..:|||:.:.|..|
pombe   568 LGRNSLQSILMLDNLLTNKVVQSDNNVKGGTLPALVHYLV--QNVHLNKDFRHSFLLTYKTFTTP 630

  Fly   156 HELLAQISQTWEHQQQDVGTGGDVVDDAGQGPGRTMMVSINSASPLTQRKGSAAAASHSSELEPR 220
            .||.                              |::|.:....|   ..|..|.|..|.|....
pombe   631 QELF------------------------------TLLVILFHELP---PPGLDATAYSSWEKGDN 662

  Fly   221 LQQRTNTQRSAQHCIRLLSEWIEIFPYDFRDER------LMQQVRILARKCVYIDNSLGKQVSRI 279
            ...:.|.      | .:::.|::  .|.|.|.:      |:.::|...|..|.....:|.    :
pombe   663 FVTKKNV------C-TVMNLWVQ--KYFFEDLKARNTLYLISEMRTFLRDHVVPSFHIGS----V 714

  Fly   280 LQLLVSRLTTLEQYEEFLQTISSEEAQSQQQQHHHHHGHHNHLHNAFQTFLGSSSHANGASGGGG 344
            :...:..|.|.|..:...|.:                     |.:...||:              
pombe   715 ILSEIDNLWTEEPPDSLTQRL---------------------LSSPMATFI-------------- 744

  Fly   345 SASGTSNSSSSGHTSSASTSNSISTTPQPDDVFGIMDMCPSCAHLAHQLTAIELERLSHIGPEEF 409
                              :.|..:.||:               ..|.|:|.:|.:.|..|...|:
pombe   745 ------------------SLNVYAYTPE---------------EFASQMTLLEFDYLKQIPSREW 776

  Fly   410 VQAFAKDYQQQAKDGSREANNSKCSGGGGGSLNDMKKTRNLESYVQWFNRLSYLTASEIVKYPKK 474
            :      ::......||.|                     :.:|:.:.|..:|...:.|::....
pombe   777 I------FRSWVSRDSRSA---------------------VRNYINFSNCFTYWIINCILEKKNT 814

  Fly   475 KQRVRIIEYWIETARECFNIGNFNSLMAIIAGLNLAPIGRLKKTWAKVQSAK---FSVLEHQMDP 536
            |.|..:|.::|:||.:|.::.||::||:|::.||.|||.||...:..|::..   .|.|...::.
pombe   815 KARTAVISFFIQTAYKCLSLQNFSTLMSIVSALNSAPIYRLHAAYKLVKAEDIICLSGLREIVET 879

  Fly   537 TSNFNSYRSTLKAAMWRSEGATEERERIIIPFFSLFVKDLYFLNEGCSNRLPNN-H-INFEKCSQ 599
            ..||::||:.|:.|           |...:||..:.:.||.|::||..:.|.:: | ::|.|..:
pombe   880 KKNFSTYRALLRKA-----------ELPCVPFLGVILSDLTFIDEGNPDVLDSSPHLLSFNKRHR 933

  Fly   600 LAKQVMEFNEWKKVNCPFERLPNVIAYL--------QNSAVLNENTLSM 640
            ||..|.:...::..:...:...::.:|:        |:.:.|.:.:||:
pombe   934 LADVVADVCRFQSSSYEMQSNTDLQSYILHRCRFVNQDLSYLFDKSLSL 982

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7369NP_649415.2 RasGEF_N 116..261 CDD:279012 28/150 (19%)
RasGEF 388..649 CDD:214539 62/266 (23%)
efc25NP_596123.1 RasGEF_N 593..700 CDD:279012 28/150 (19%)
RasGEF 755..932 CDD:279011 54/214 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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