DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12355 and AT4G03410

DIOPT Version :10

Sequence 1:NP_001097610.1 Gene:CG12355 / 2768954 FlyBaseID:FBgn0040805 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_974505.1 Gene:AT4G03410 / 827932 AraportID:AT4G03410 Length:361 Species:Arabidopsis thaliana


Alignment Length:194 Identity:43/194 - (22%)
Similarity:81/194 - (41%) Gaps:29/194 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PFVTNSAIYGSLYVGAEYSQQFASKRWLATA--SKP-EDIDYATIGRYAVMGTAVYAPTLYLWYK 77
            |.:...||.|.:|...:         |:|..  .|| .:.|...:.|..::|..::....:.:|:
plant   139 PVLAKMAISGIVYSLGD---------WIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQ 194

  Fly    78 WLDRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYA--GMSIMEGSADIFLELREKFVPTFMRSCI 140
            :.:..||.....::..|:..||.|.:....::::.  |:...:..||||.|::..|:|.......
plant   195 FCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPMLTAGWK 259

  Fly   141 FWLPAQALNFSLVAPRFRVIYMGICGLIWVNILCWTKRQSLPVATKEIATDSNNNAAAIRNSET 204
            .|..|..:.:.::....|::::....||||.||               :|.||..|.|..:.||
plant   260 LWPLAHLVTYGVIPVDQRLLWVDCIELIWVTIL---------------STYSNEKAEAQASEET 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12355NP_001097610.1 Mpv17_PMP22 115..174 CDD:461182 15/58 (26%)
AT4G03410NP_974505.1 Mpv17_PMP22 232..293 CDD:461182 17/75 (23%)

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