DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12355 and AT3G24570

DIOPT Version :10

Sequence 1:NP_001097610.1 Gene:CG12355 / 2768954 FlyBaseID:FBgn0040805 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_189100.1 Gene:AT3G24570 / 822053 AraportID:AT3G24570 Length:235 Species:Arabidopsis thaliana


Alignment Length:203 Identity:46/203 - (22%)
Similarity:83/203 - (40%) Gaps:30/203 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VTNSAIYGSLYVGAEYSQQFASKR---WLATASKPEDID----------------YATIGRYAVM 63
            :::..::|...|.|:|.....:||   .|...:|..|.|                :..:...::.
plant    22 ISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVKWKQDAEFKVNWKRVAITSMF 86

  Fly    64 GTAVYAPTLYLWYKWLD-------RAFPGTTKVIIVKKLVLDQFVLTPYLLTVF--YAGMSIMEG 119
            |.....|..:.||:.||       |..|.:|: .:..|:.:|..:..|..|.||  |.|.:..:.
plant    87 GFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTR-FVAAKVAMDGLIFGPVDLLVFFTYMGFATGKN 150

  Fly   120 SADIFLELREKFVPTFMRSCIFWLPAQALNFSLVAPRFRVIYMGICGLIWVNILCWTKRQSLPVA 184
            :|::...|:..|:|........|...|..||..|..:::::|:.|..|:....|.|.::|. ..|
plant   151 TAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQLLYVNIFCLVDSAFLSWVEQQK-DAA 214

  Fly   185 TKEIATDS 192
            .|:..|.|
plant   215 WKQWFTSS 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12355NP_001097610.1 Mpv17_PMP22 115..174 CDD:461182 12/58 (21%)
AT3G24570NP_189100.1 Mpv17_PMP22 144..205 CDD:461182 13/60 (22%)

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