DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12355 and MPV17

DIOPT Version :9

Sequence 1:NP_001097610.1 Gene:CG12355 / 2768954 FlyBaseID:FBgn0040805 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_002428.1 Gene:MPV17 / 4358 HGNCID:7224 Length:176 Species:Homo sapiens


Alignment Length:167 Identity:49/167 - (29%)
Similarity:72/167 - (43%) Gaps:15/167 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YPFVTNSAIYGSLY-VGAEYSQQFASKRWLATASKPEDIDYATIGRYAVM---GTAVYAPTLYLW 75
            :|:.......|||. :|...|||...:|.|....:         ||...|   |.....|.:..|
Human    14 HPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQR---------GRTLTMVSLGCGFVGPVVGGW 69

  Fly    76 YKWLDRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYAGMSIMEG--SADIFLELREKFVPTFMRS 138
            ||.|||..||||||..:||::|||....|..|..|...:..:.|  :.|.:.:|:..:....:.:
Human    70 YKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQRDYPDALITN 134

  Fly   139 CIFWLPAQALNFSLVAPRFRVIYMGICGLIWVNILCW 175
            ...|...|..||.||...:|:..:....:||.:.|.|
Human   135 YYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12355NP_001097610.1 Mpv17_PMP22 116..178 CDD:282035 14/62 (23%)
MPV17NP_002428.1 Mpv17_PMP22 109..170 CDD:367825 12/60 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1944
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.