DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12355 and CG5906

DIOPT Version :10

Sequence 1:NP_001097610.1 Gene:CG12355 / 2768954 FlyBaseID:FBgn0040805 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster


Alignment Length:173 Identity:49/173 - (28%)
Similarity:79/173 - (45%) Gaps:25/173 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLISGVRNLFH------RYPFVTNSAI-YGSLYVGAEYSQQFAS-----KRWLATASKPEDIDYA 55
            |.::...:.||      :|...||..| .|...||....|.:..     ..|..|.:....|...
  Fly     8 RRMTNAMDRFHQIAFSPKYLLFTNIGISVGLSMVGDTMEQSYERLIGELPDWNRTRTIRMGISGL 72

  Fly    56 TIGRYAVMGTAVYAPTLYLWYKWLDRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYAGMSIMEGS 120
            |:|.           ..:.||:.||..||..|..::|.|::||||:.:|:.:.||:..|:|:|.:
  Fly    73 TVGL-----------VCHYWYQHLDYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAILEDN 126

  Fly   121 A--DIFLELREKFVPTFMRSCIFWLPAQALNFSLVAPRFRVIY 161
            .  ::..|:|||.:..:......|..||.:||.|:.|::||.|
  Fly   127 TWEELEQEIREKALVLYAAEWTVWPLAQFINFLLIKPQYRVFY 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12355NP_001097610.1 Mpv17_PMP22 115..174 CDD:461182 16/49 (33%)
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 16/49 (33%)

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