DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12355 and Pxmp2

DIOPT Version :9

Sequence 1:NP_001097610.1 Gene:CG12355 / 2768954 FlyBaseID:FBgn0040805 Length:204 Species:Drosophila melanogaster
Sequence 2:XP_038945225.1 Gene:Pxmp2 / 29533 RGDID:61812 Length:227 Species:Rattus norvegicus


Alignment Length:190 Identity:43/190 - (22%)
Similarity:72/190 - (37%) Gaps:38/190 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YPFVTNSAIYGSLYVGAEYSQQFASKRWLATASKPEDIDYATIGRYAVMGTAVYAPTLYLWYKWL 79
            ||.||.:...|.|........|...|:   .......::.:.:.||.|.|..|..|..:..|.::
  Rat    32 YPVVTKAVSSGILSALGNLLAQMIEKK---QKKDSRSLEVSGLLRYLVYGLFVTGPLSHYLYLFM 93

  Fly    80 DRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYAGMSIMEGSAD---------------------- 122
            :...|.......||:|:||:....|..|.:|:..|:::|..:.                      
  Rat    94 EYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEVLSQAWWLVPVIAILRRLRKEDYHKF 158

  Fly   123 -IFLELREKFVPTF---MRSCIF---------WLPAQALNFSLVAPRFRVIYMGICGLIW 169
             :.||.:.|.:..|   |||..:         |.|.|.:|.:.|..:|||::..:..|.|
  Rat   159 KVILEYKGKNISVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFW 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12355NP_001097610.1 Mpv17_PMP22 116..178 CDD:282035 18/89 (20%)
Pxmp2XP_038945225.1 Mpv17_PMP22 165..223 CDD:397992 15/54 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1944
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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