DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12355 and Pxmp2

DIOPT Version :9

Sequence 1:NP_001097610.1 Gene:CG12355 / 2768954 FlyBaseID:FBgn0040805 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_033019.2 Gene:Pxmp2 / 19301 MGIID:107487 Length:193 Species:Mus musculus


Alignment Length:161 Identity:42/161 - (26%)
Similarity:75/161 - (46%) Gaps:6/161 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LFHRYPFVTNSAIYGSLYVGAEYSQQFASKRWLATASKPEDIDYATIGRYAVMGTAVYAPTLYLW 75
            |...||.:|.:...|.|........|...||    ....::::.:.:.||.|.|..|..|..:..
Mouse    28 LLKLYPVLTKAVSSGILSALGNLLAQTIEKR----KKDSQNLEVSGLLRYLVYGLFVTGPLSHYL 88

  Fly    76 YKWLDRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYAGMSIMEG-SADIFL-ELREKFVPTFMRS 138
            |.:::.:.|.......||:|:||:....|..|.:|:..|:::|| :..:|: ::|..|.|....:
Mouse    89 YLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNVSVFVAKMRSGFWPALQMN 153

  Fly   139 CIFWLPAQALNFSLVAPRFRVIYMGICGLIW 169
            ...|.|.|.:|.:.|..:|||::..:..|.|
Mouse   154 WRMWTPLQFININYVPLQFRVLFANMAALFW 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12355NP_001097610.1 Mpv17_PMP22 116..178 CDD:282035 16/56 (29%)
Pxmp2NP_033019.2 Mpv17_PMP22 129..191 CDD:282035 16/56 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1944
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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