DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pura and arhgef25b

DIOPT Version :9

Sequence 1:NP_996016.2 Gene:Pura / 2768948 FlyBaseID:FBgn0035802 Length:1904 Species:Drosophila melanogaster
Sequence 2:XP_005166148.2 Gene:arhgef25b / 569561 ZFINID:ZDB-GENE-080225-17 Length:625 Species:Danio rerio


Alignment Length:674 Identity:164/674 - (24%)
Similarity:286/674 - (42%) Gaps:130/674 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1096 MKHLAKGRDLHAAALKVSVLSESANNLKSALDQFAQKLELAHERYDAAGRLLHLLTQHQRENA-A 1159
            ||.|||             |..:...|..:|......|.|.::::          .|.|.|.. .
Zfish     1 MKSLAK-------------LQGNTEQLLMSLSNTLPSLTLNNQQW----------IQEQNEGCLL 42

  Fly  1160 REELQRLAEQLGATSLLEKHW-------PVMRKTHTL-------------PVAS-STPAAAAGKR 1203
            .||.|..:::.......:|.|       |..:.::||             |.|| ||...:....
Zfish    43 LEEKQGCSKKGAGPENEKKSWNQRLERIPEDKDSYTLTGLSDVSLPPDDPPSASVSTDDLSPISP 107

  Fly  1204 VSYRCSSASRSSFEGGPSSSNCSCWRES--RNLEDMDQMEEEEEEQDHDCDGGDGEEQQSK---- 1262
            .:::..|:.|:|.....|......|..|  |.|.                .||..:.|.||    
Zfish   108 SNHQLFSSRRASVTSTRSIKAFKRWLSSPVRRLS----------------LGGGNKSQSSKGIQS 156

  Fly  1263 ------------IADSGLGVCDNCERNPKLARICSCQSLNEKS------HDELLEDECFDRPSKR 1309
                        .|.|.|...:..::..:..|...|..|:.::      :...|.| .|.|....
Zfish   157 PEGSTYMFLPLSPAQSPLSPMEKSQKLTRSYRSLDCGELSRETSPDSPYYPRYLND-LFQRNQSF 220

  Fly  1310 YMDIMHSPMEANAHLQCHGSSLELPKLEELSCLDPKIQKTLLLIMREMIGTERDYVRSLYYVIEN 1374
            .:....||...:..|.....|||..:....:.|:..|     .::.|::.||:.||..|..|:|.
Zfish   221 DVQTSVSPSLTDKTLVEQSQSLEDNEQHRRTALEKSI-----YVLTELVETEKLYVEDLGLVVEG 280

  Fly  1375 YIDELLREDIPQPLRGQRNVIFGNIEKIFEFHNSHFLGELERYERNPLKVGAAFLEMESKFYLYA 1439
            |:..:....:|:.|.|:..::||||.:|:::|..:||||||:....|..:...|::.|.:..:|.
Zfish   281 YMLTMRSVGVPEYLEGKDKIVFGNIHQIYDWHKDYFLGELEKCVSEPDLLAQLFIKHERRLNMYV 345

  Fly  1440 LYNKNKPKSDTLLSEYGSSFFKPKQMQLQDKLDLASYLLKPVQRMGKYALLLQQLVKACKGVEGA 1504
            :|.:|.|||:.::|||..::|:..:.||..:|.|...|:|||||:.||.|||:..:|        
Zfish   346 VYCQNMPKSEHIVSEYIETYFEDLRQQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLK-------- 402

  Fly  1505 ALQEIAADVEELQRAEEMVKFQLRHGNDLLAMDSLRDCDVNVKEQGRLLRQNEFLVWQGRG---G 1566
            ...:.....|:|:||.|::.|..:..||::.:..|:..:..::.||:||:|:.|...:...   .
Zfish   403 YYTKAGRQTEDLERAVEVMCFVPKRCNDMMNVGRLQGFEGQLRAQGKLLQQDTFTFIENENSILS 467

  Fly  1567 KKTLRQVFLFEELVLFSKARRFPDHK---NLDIYIYKNSIKTSDIGLTAHTGDSATKFEIWFRKR 1628
            :...|:|||||:|::.|:..   |.|   :|..|:||||||.|.:.:.....:...:..:  ..|
Zfish   468 RPKERRVFLFEQLIILSEPM---DRKRGFSLPGYVYKNSIKISCLSIEDRCPEDPCRLVL--TSR 527

  Fly  1629 KPDDT---WMLQCMSEDIKNAWTEEISKLLWKQAKRN--------REVRLAEMSSMGIGSKPCLD 1682
            ..|.:   ::|:..|.:|:.:|..:|.::|  :.:||        .|.:..|:.|:.:|......
Zfish   528 NIDGSLQKFILRASSSEIRTSWANDIIQML--ETQRNFLNALQSPIEFQRKEIKSLSLGKSMTAS 590

  Fly  1683 ------IRP-SNNQISDRSIPLAQ 1699
                  :|| |:..|..:::|..|
Zfish   591 ASLNSGLRPYSSASIDRQTLPCLQ 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PuraNP_996016.2 PX_domain 15..>52 CDD:295365
RhoGEF 1353..1532 CDD:279015 59/178 (33%)
PH_puratrophin-1 1524..1663 CDD:270062 39/155 (25%)
PH 1562..1655 CDD:278594 26/101 (26%)
arhgef25bXP_005166148.2 RhoGEF 258..429 CDD:238091 59/178 (33%)
PH-like 434..573 CDD:327399 36/145 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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