DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pura and CG30456

DIOPT Version :9

Sequence 1:NP_996016.2 Gene:Pura / 2768948 FlyBaseID:FBgn0035802 Length:1904 Species:Drosophila melanogaster
Sequence 2:NP_611188.3 Gene:CG30456 / 36929 FlyBaseID:FBgn0050456 Length:682 Species:Drosophila melanogaster


Alignment Length:671 Identity:169/671 - (25%)
Similarity:286/671 - (42%) Gaps:114/671 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1096 MKHLAKGRDLHAAALKVSVL-SESANNLKSALDQFAQKLELAH---ERYDAAGRLLHLLTQHQRE 1156
            :.|.|..::.|::.|..|.| |.......|::...:..::|::   ...|::.|...||..|:.|
  Fly    31 ISHQAAEQERHSSTLVSSNLESNDVARPVSSVSSSSSSIQLSYSVNSDTDSSYRHRSLLKMHEAE 95

  Fly  1157 NAAREELQRLAE-----QLGATSLLEKHWPVMR-------------KTHTLPVASS--------- 1194
            :......:...|     |....:||:....|.|             :.|:|.:..:         
  Fly    96 SVGGLGTESTPESPMSPQTPDPALLDVRQKVHRFEAFRTNICFIKQERHSLKLLENRRHPSFEDQ 160

  Fly  1195 -----TPAAAAGKRV-----SYRCSSASRS--SFEGGPSSSNCSCWRESRNLEDMDQMEEEEEEQ 1247
                 ||.|...:|:     ..|.||.|.|  ||:.|        ..|.|:.:::||:      .
  Fly   161 SEDHHTPPATPPRRIRLPGLGSRGSSRSSSIPSFQAG--------IHEVRSEDEVDQI------S 211

  Fly  1248 DHDCDGGDGEEQ------QSKIADSGLGVCDNCERNPKLARICSCQSLNEKSHDELLEDECFDR- 1305
            |.:.|.....|:      .|::..|. .|.|:.....::.|..|.....|.....|.....|.| 
  Fly   212 DFETDSHTAAEEYLVVDTTSEVVPSE-EVADSKVDQQQVQRSISADQSKEALTLPLKMRNDFPRN 275

  Fly  1306 ---PSKRYMDIMHSPMEANAHLQCHGSSLELPKLEELSC---LDPKIQKTLLLIMREMIGTERDY 1364
               ..:|..:|:.:   .|.||.....|:..||.||...   |..|..|.:..|:.|:|.||..|
  Fly   276 YRSTPRRKTEIIGT---TNEHLVGKFHSVYQPKDEEEEVEIELRDKSDKCVHPILEELIKTEEAY 337

  Fly  1365 VRSLYYVIENYIDELLREDIPQPLRGQRNVIFGNIEKIFEFHNSHFLGELERYERNPLKVGAAFL 1429
            |.:|:..||||.:...|:|:|..|||::..:|||||:|.|||...||..|:|..|:..::...||
  Fly   338 VNNLFTGIENYGNIFQRKDLPLGLRGKKYDLFGNIEQIAEFHRDEFLPMLQRNRRDLKRLFDEFL 402

  Fly  1430 EM--ESKFYLYALYNKNKPKSDTLLSEYGSSFFKPKQMQLQDKLDLASYLLKPVQRMGKYALLLQ 1492
            :.  :..||.|.::..||.||..|...| .::|...:::..|||.:.|:|::|:|||.:|.|||.
  Fly   403 QFLDQHCFYGYVIFTMNKQKSLKLCDLY-KNYFTSIRLERDDKLGINSFLVQPIQRMARYPLLLT 466

  Fly  1493 QLVKACKGVEGAALQEIAADVEELQRAEEMVKFQLRHGNDLLAMDSLRDC-DVNVKEQGRLLRQN 1556
            |.:..........::.:   :|...|.|:.::..|...|:...::.:.|| :.||..||:..:.|
  Fly   467 QFINTFFKNRDIVMKPL---IESCCRLEKRLRALLTTTNESEIINDIVDCHEFNVYYQGKFRKVN 528

  Fly  1557 EFLVWQGRGGKKTLRQVFLFEELVLFSKARRFPDHKNLDIYIYKNSIKTSDIGLTAHTGDSATKF 1621
            ||.|...:..:....:||:|::.:::::.:    .|||   ::........||::|.|    ..|
  Fly   529 EFQVLDHKLKRSYRSKVFIFDKCIIYTEIK----GKNL---LFHGRYPCEHIGISAKT----KSF 582

  Fly  1622 EIWFRKRKPDD-----------TWMLQCMSEDIKNAWTEEISKLLWKQAKRNREV-RLAEMSSMG 1674
            .:::.:||..:           .| |..:.:.|.|...||..||..:.::.|..: |.|...|: 
  Fly   583 TLYYERRKQQECEFTADPVQIAIW-LDLIRDMINNYANEERQKLQERYSRENDHLHRKAPSFSL- 645

  Fly  1675 IGSKPCLDIRPSNNQISDRSI 1695
                    .|.||...||..|
  Fly   646 --------YRDSNRFSSDSGI 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PuraNP_996016.2 PX_domain 15..>52 CDD:295365
RhoGEF 1353..1532 CDD:279015 62/180 (34%)
PH_puratrophin-1 1524..1663 CDD:270062 33/150 (22%)
PH 1562..1655 CDD:278594 20/103 (19%)
CG30456NP_611188.3 RhoGEF 326..470 CDD:279015 58/144 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462275
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0689
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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