DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pura and Arhgef6

DIOPT Version :10

Sequence 1:NP_996016.2 Gene:Pura / 2768948 FlyBaseID:FBgn0035802 Length:1904 Species:Drosophila melanogaster
Sequence 2:XP_008771873.1 Gene:Arhgef6 / 363509 RGDID:1359674 Length:789 Species:Rattus norvegicus


Alignment Length:343 Identity:65/343 - (18%)
Similarity:138/343 - (40%) Gaps:64/343 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1344 PKIQKTLLLIMREMIGTERDYVRSLYYVIENYIDELLREDIPQPLRGQRNV-------IFGNIEK 1401
            |..:....::::.::.||::|.:.|..::..|:         :||:...|:       :.||.|:
  Rat   260 PLTKNYYTVVLQNILDTEKEYAKELQSLLVTYL---------RPLQSNNNLSTVEFTCLLGNFEE 315

  Fly  1402 IFEFHNS--HFLGELERYERNPLKVGAAFLEMESKF-YLYALYNKNKPKSDTLLSEYGSS---FF 1460
            :..|..:  ..|.|..:...|..|||...|.:...| .:|..|..|.|.:..:|:::...   |.
  Rat   316 VCTFQQTLCQALEECSKSPENQHKVGGCLLNLMPHFKSMYLAYCANHPSAVNVLTQHSDDLERFM 380

  Fly  1461 KPKQMQLQDKLDLASYLLKPVQRMGKYALLLQQLVKACKGVEG---------AALQEIAADVEEL 1516
            :.:.......|.|.:.|.||..|:.||..|||:|.:..:....         .|.:.:....::|
  Rat   381 ENQGASSPGILILTTSLSKPFMRLEKYVTLLQELERHMEDTHPDHQDILKAIIAFKSLMGQCQDL 445

  Fly  1517 QRAEEM------VKFQLRHGNDLLAMDSLRDCDVNVKEQGRLLRQNEFLVWQGRGGKKTLRQVFL 1575
            ::.:::      ...|...|:|             :|..|.::..::.::..|...:|..|...|
  Rat   446 RKRKQLELQILSEPIQAWEGDD-------------IKTLGNVIFMSQVVMQHGACEEKEERYFLL 497

  Fly  1576 FEE-LVLFSKARRFPDHKNLDIYIYKNSIKTSDIGLT---AHTGDSATKFEIWFRKRKPDDTWML 1636
            |.. |::.|.:.|      :..::|:..:..:.:.:|   ...|:..| |||   .....:..::
  Rat   498 FSSVLIMLSASPR------MSGFMYQGKVPIAGMVVTRLDEIEGNDCT-FEI---TGSTVERIVV 552

  Fly  1637 QCMSEDIKNAWTEEISKL 1654
            .|.:......|.|::::|
  Rat   553 HCNNNQDFQEWMEQLNRL 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PuraNP_996016.2 COG4913 <1020..>1167 CDD:443941
RhoGEF 1353..1524 CDD:459876 40/198 (20%)
PH_puratrophin-1 1524..1663 CDD:270062 24/135 (18%)
Arhgef6XP_008771873.1 CH_alphaPIX 25..141 CDD:409114
RhoGEF67_u1 139..184 CDD:465201
SH3_alphaPIX 186..242 CDD:212993
RhoGEF 266..443 CDD:238091 39/185 (21%)
PH_Cool_Pix 474..572 CDD:269932 19/107 (18%)
RhoGEF67_u2 600..691 CDD:465200
betaPIX_CC 698..782 CDD:465158
Blue background indicates that the domain is not in the aligned region.

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