DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pura and Mcf2

DIOPT Version :9

Sequence 1:NP_996016.2 Gene:Pura / 2768948 FlyBaseID:FBgn0035802 Length:1904 Species:Drosophila melanogaster
Sequence 2:XP_008771798.1 Gene:Mcf2 / 317598 RGDID:1566098 Length:1110 Species:Rattus norvegicus


Alignment Length:1292 Identity:290/1292 - (22%)
Similarity:490/1292 - (37%) Gaps:349/1292 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   612 AKMRSNSVGNEASG---ASTSPALPLYCLGNSFPHIDSDEEASDSIGPGKHHSLETCETELLPSS 673
            |:.||...|...:|   |.:.||          |.:.|...|..::......:..|.:.:|.|. 
  Rat     2 AEARSPPTGPSPAGPPPAGSPPA----------PALASPWLAFRNLPKAASRAPRTRKRQLNPD- 55

  Fly   674 SIAELPEKLLTSGVYLPGTRTLQGDPLVTVDAA-----------------CVASA---------- 711
                       :|.::|.|:|:.    |.||.|                 |:..|          
  Rat    56 -----------NGTFVPFTQTIP----VQVDMAMALHRVRIAEKYGKNYLCLLQAVFLAETGLLL 105

  Fly   712 ---GINCYEMATLLL----------YYSTIPERSSCPFTTPATPGTTATINGHKSTEQQQQQQQQ 763
               .||.:.|..:..          :..|.||  :|.|...........:|...|.         
  Rat   106 QLKDINHFLMQDIAFLSGGRGRDNAWIITFPE--NCNFRCIPEEVIAKVLNYLTSI--------- 159

  Fly   764 QQQQKQQPAQQTFTILIAIEKSQHLCVIDLICQSLRLLAKQI-----GNCEILAVCPDSSLLQLC 823
               .:|..:...|||::.....        ...||::..::|     ||..::.|...:|.||..
  Rat   160 ---ARQSGSDSRFTIILDRRMD--------TWSSLKISLQKISASFPGNLHLVLVLRPTSFLQRT 213

  Fly   824 NGQQQQKLQQQQQQNNNSDHPEPSSPSPVDLVKFISVDQVTTSVAPSQLPAGLLPSVPALSTLPG 888
            ......:..|:...            ..:.:|...||..:.|.:...||       .|.|.   |
  Rat   214 FTDIGFRFSQEDFM------------LKLPVVMLSSVSDLLTYIDDKQL-------TPELG---G 256

  Fly   889 ISQRHHDATKWREFFAQLEAFQRQCSTAGGRLVSALSEIRAADL-QGLPTRRQLYGQHRALSRAL 952
            ..|..|  ::|..|...:|.|..........|.|..:|:...:| ..:|:..::.. .||....|
  Rat   257 TLQYCH--SEWIIFRNAIEKFAVTVKEMAQMLQSFGTELAETELPDDIPSIEEILA-GRAERYHL 318

  Fly   953 MDSQLHSLRKMGAGQLARLQ--DLARAITSAPGSP-----------RMTSQPQSSSSSSSGAF-- 1002
            :.:.|.::.|.|...|..||  |....::|:...|           ::.:|.....::..|.:  
  Rat   319 LKNDLTTVTKEGKVLLMNLQVPDTEENLSSSHECPQHINGDWQTIKKLLAQVHDMETAFDGFWEK 383

  Fly  1003 --LNVDAACKLRKVTLLFNEVDRAAQRLEQLTEQRRERLRQLTRQRALEDEISEVTSWMGSDGAE 1065
              |.::...:|.|....|.||   ..::|.|..|:|              |:.:||..: :...:
  Rat   384 HQLKMEQYLQLWKFEQEFQEV---VTQVEFLLSQQR--------------ELGDVTGNL-AQVKQ 430

  Fly  1066 NLQKFSQLHWDNESQLRTQEQEFEKYYFIAMKHLAKGR--DLHAAALKVSVLSESANNLKSALDQ 1128
            .|:|...|  |::||                :.|||||  .||...|        |:|...|||.
  Rat   431 RLKKIEIL--DDKSQ----------------ELLAKGRIVILHGHKL--------ASNHHYALDL 469

  Fly  1129 FAQKL------------ELAHERYDAAGRL-LHLLTQHQRENA----------------AREELQ 1164
            ..|:.            |:..:|...:... :|.|.|..|:..                .:|:.|
  Rat   470 ICQRCNELRYLSDILVNEIRSKRIQLSRTFKMHRLLQQARQCCDQGECLLANRGMDKFQTKEDAQ 534

  Fly  1165 RLAEQLGATSLLEKHWP-----VMRKTHTLPVASSTPAAAAGKRVSYRCSSASRSSFEGGPSSSN 1224
            :..:.:  .:.|:...|     :........|..|....|..|.:..:..:. ||.||       
  Rat   535 KALQDV--DNFLQMAMPFINYDIENLQFEFDVLLSPELKAQMKNIQRKLENI-RSVFE------- 589

  Fly  1225 CSCWRESRNLEDMDQMEEEEEEQDHDCDGGDGEEQQSKIADSGLGVCDNCERNPKLARICSCQSL 1289
                    |.::..::.::..|         |..|:...|...:........:||...|      
  Rat   590 --------NQQNAYKISKDRPE---------GAVQRMIPAPESVMRARTIFFSPKHVGI------ 631

  Fly  1290 NEKSHDELLEDECFDRPSKRYMDIMHSPMEANAHLQCHGSSLEL-----PKLEELSCLDPKIQKT 1349
               .:......:.|.:..|.:..|.   .::|..:|....|.|.     |||:  |.||  |.|.
  Rat   632 ---GYSFFQACKIFSKVKKSWRQIQ---AQSNVKVQATQDSQEKNFDQPPKLD--SSLD--ILKN 686

  Fly  1350 LLLIMREMIGTERDYVRSLYYVIENYIDEL----LREDIPQPLRGQRNVIFGNIEKIFEFHNSHF 1410
              .::.|:|.|||.|||.|:.|:..|..|:    :.:.:|..||.:::|:|||:.:|:||||:.|
  Rat   687 --HVLNELIQTERAYVRELFTVLLGYRSEMDNPQMFDLMPPLLRNKKDVLFGNMAEIYEFHNNIF 749

  Fly  1411 LGELERYERNPLKVGAAFLEMESKFYLYALYNKNKPKSDTLLSEYGS-SFFKPKQMQLQDKLDLA 1474
            :..||.....|.:||..|||.:..|.:||.|.:|||:|:.:..:|.. :||:..|.:|:.:|.|.
  Rat   750 MSRLEDCSDAPERVGPCFLERKEDFQMYAKYCQNKPRSELIWRKYSECAFFQECQRKLKHRLGLD 814

  Fly  1475 SYLLKPVQRMGKYALLLQQLVKACKGVEGAA-LQEIAADVEELQRAEEMVKFQLRHGNDLLAMDS 1538
            |||||||||:.||.|||::|:|..|..||.. |:|....:.||          |:..||.:...:
  Rat   815 SYLLKPVQRITKYQLLLKELLKYSKEGEGTTKLKEALDSMLEL----------LKSVNDSMHQTA 869

  Fly  1539 LRDCDVNVKEQGRLLRQNEFLVWQG-RGG----------KKTLRQVFLFEELVLFSKARRFPDHK 1592
            :.....|:.:.|:::.|..|.||.| |.|          |...|.:||:|:.|:|.| |||...:
  Rat   870 INGYVGNMNDLGKMILQGAFSVWVGHRKGATKMKDFARFKPMQRHLFLYEKAVMFCK-RRFESGE 933

  Fly  1593 NLD---IYIYKNSIKTSDIGLTAHTGDSATKFEIWFRKRKPDDTWMLQCMSEDIKNAWTEEISKL 1654
            ..|   .|.:|:.:|..:.|:|.|......|||||:.::  ::.:::|..:.|:|..|.:||..:
  Rat   934 GADRYPSYSFKHCLKMEEAGITEHVKGDNRKFEIWYGEK--EEIYIVQAPNIDVKMLWLKEIRNI 996

  Fly  1655 LWKQAKRNREVRLAEMSSMGIGSKPCLDIRPSNNQISDR-SIPLAQLNKTPK----LRHSEPGKG 1714
            |.||                   :..|..:...:|:||: .:|..|.|...:    |...|.| .
  Rat   997 LLKQ-------------------QELLTAKTQQDQLSDQDQLPPQQQNAEKQEETLLNAVEAG-A 1041

  Fly  1715 SMRRPNSL--ISESSL-----------------SSGTSTTSG---SSISGGSSSGHN 1749
            .:.:.:::  :.|::|                 :.||:.|:.   :|:|..|.:|.:
  Rat  1042 EVEQASAMMEVREAALLVQAEANCTTWNGMLPCTEGTAATAEHPCNSLSPNSDNGED 1098

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PuraNP_996016.2 PX_domain 15..>52 CDD:295365
RhoGEF 1353..1532 CDD:279015 72/184 (39%)
PH_puratrophin-1 1524..1663 CDD:270062 44/152 (29%)
PH 1562..1655 CDD:278594 32/106 (30%)
Mcf2XP_008771798.1 SEC14 119..259 CDD:214706 30/183 (16%)
SPEC 399..590 CDD:295325 48/252 (19%)
RhoGEF 685..862 CDD:238091 73/188 (39%)
PH-like 869..1000 CDD:302622 39/133 (29%)
PH 884..997 CDD:278594 36/115 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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