DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pura and Plekhg2

DIOPT Version :9

Sequence 1:NP_996016.2 Gene:Pura / 2768948 FlyBaseID:FBgn0035802 Length:1904 Species:Drosophila melanogaster
Sequence 2:XP_006539499.1 Gene:Plekhg2 / 101497 MGIID:2141874 Length:1366 Species:Mus musculus


Alignment Length:547 Identity:129/547 - (23%)
Similarity:201/547 - (36%) Gaps:168/547 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1283 ICSCQSLNEKSHDELLEDECFDRP-SKRYMDIMHSP-------------MEANAHLQCHGSSLE- 1332
            :|.|.:::             |.| :.:....|.||             .|.:....|..|..| 
Mouse    25 VCDCAAVS-------------DTPTAAQAATTMASPRGSGSSTSLSTVGSEGDPSPACSASRPEP 76

  Fly  1333 LPKLEELSCLDPKIQKTLL--------------LIMREMIGTERDYVRSLYYVIENYIDELLRED 1383
            ||        :|.|:..||              .:.||::.|||.|||.|..::|:|:..|:...
Mouse    77 LP--------EPPIRLHLLPVGIQGSVKPSRLERVAREIVETERAYVRDLRSIVEDYLGPLMDGR 133

  Fly  1384 IPQPLRGQRNVIFGNIEKIFEFHNSHFLGELERYERNPLKVGAAFLEMESKFYLYALYNKNKPKS 1448
            .......|...:|.|||.|:|| :|..|.:||... :...:...|::....|.:|.||..|.|.|
Mouse   134 ALGLNMEQVGTLFANIEDIYEF-SSELLEDLEGCS-SAGGIAECFVQRSEDFDIYTLYCMNYPSS 196

  Fly  1449 DTLLSEYGSS-----FFKPKQMQLQDKLDLASYLLKPVQRMGKYALLLQQLVKA-CKG------- 1500
            ..||.|...|     :.:.:|.||:..|.|.|:|||||||:.||.||||:|.|. .:|       
Mouse   197 LALLRELSVSPPATLWLQERQAQLRHSLPLQSFLLKPVQRILKYHLLLQELGKHWAEGPDSGGRE 261

  Fly  1501 -VEGA--ALQEIAADVEELQRAEE----MVKFQLRHGN----DLLAMDSLRDCDVNVKEQGRLLR 1554
             ||.|  ::..:|..:.:::|.:|    :.:.|.|.|.    :|.|.             |.|:.
Mouse   262 MVEEAIVSMTAVAWYINDMKRKQEHAARLQEVQRRLGGWTGPELSAF-------------GELVL 313

  Fly  1555 QNEFLVWQG-----RGGKKTLRQVFLFEELVLFSKARRFPDHKNLDIYIYKNSI----------- 1603
            :..|....|     |||::.|   |||..::|.:| ||.|:      |.||..|           
Mouse   314 EGTFRGGGGGGPRLRGGERLL---FLFSRMLLVAK-RRGPE------YTYKGHIFCCNLSVSETP 368

  Fly  1604 ------KTSDIGLTAHTGDSATKFEIWFRKRKPDDTWMLQCMSEDIKNAWTEEISKLLWKQAKRN 1662
                  |.||:.:..|                   ..:.|..:::.|..|...:.:|.::.    
Mouse   369 RDPLGFKVSDLTIPKH-------------------RHLFQAKNQEEKRLWIHCLQRLFFEN---- 410

  Fly  1663 REVRLAEMSSMGIGSKPCLDIRPSNNQISDRSIPLA-QLNKTPKLRH-SEPGKGSMRRPNSLISE 1725
                                 .|::.....:.:.|. .|:..||.:| .||....:..|... ..
Mouse   411 ---------------------HPASIPAKAKQVLLENSLHCAPKSKHIPEPPTSPLDSPRPR-DA 453

  Fly  1726 SSLSSGTSTTSGSSISGGSSSGHNDGG 1752
            ...:.|....:.|....||..|....|
Mouse   454 PGFTPGRRNPAPSPRLSGSRRGRRQSG 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PuraNP_996016.2 PX_domain 15..>52 CDD:295365
RhoGEF 1353..1532 CDD:279015 67/202 (33%)
PH_puratrophin-1 1524..1663 CDD:270062 33/164 (20%)
PH 1562..1655 CDD:278594 24/114 (21%)
Plekhg2XP_006539499.1 RhoGEF 103..278 CDD:366202 62/176 (35%)
PH_PLEKHG1_G2_G3 260..410 CDD:270063 39/191 (20%)
PTZ00449 <351..742 CDD:185628 27/175 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.