DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pura and arhgef7

DIOPT Version :9

Sequence 1:NP_996016.2 Gene:Pura / 2768948 FlyBaseID:FBgn0035802 Length:1904 Species:Drosophila melanogaster
Sequence 2:XP_012813343.1 Gene:arhgef7 / 100145259 XenbaseID:XB-GENE-962606 Length:861 Species:Xenopus tropicalis


Alignment Length:568 Identity:115/568 - (20%)
Similarity:201/568 - (35%) Gaps:162/568 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1264 ADSGLGVCDNCERNPKLARICSCQSLNEKSHDELLEDECFDRPSK------RYMDIM-----HSP 1317
            ||.|||....|.|:         .|...||.|.|.......|.||      |.:|:.     |..
 Frog   111 ADIGLGSDSVCARS---------SSHRIKSFDSLGSQSVLSRSSKLLQSQYRSLDMTENSNHHMV 166

  Fly  1318 MEANAHLQ---------CHGSSLELPKLEE-----------------------LSCLDPKIQKTL 1350
            :.|..:.|         ..|..:.:.:|||                       .|...|...|:.
 Frog   167 VRAKFNFQQTNEDELSFNKGDLIHVTRLEEGGWWEGTHSGKTGWFPSNYVREVKSSEKPVSPKST 231

  Fly  1351 LL-------------------IMREMIGTERDYVRSLYYVIENYIDELLREDIPQPLRGQRNV-- 1394
            .|                   :::.::.||.:|.:.|..::.||:..|...:...|    .|:  
 Frog   232 TLKSPPKGFDTSAINKSYYNVVLQNILDTEGEYSKELQDILSNYLRHLQTSEKLSP----TNISY 292

  Fly  1395 IFGNIEKIFEFHN--SHFLGELERYERNPLKVGAAFL----EMESKFYLYALYNKNKPKSDTLLS 1453
            :.||:|:|..|..  ...|.|..:......:||..|:    :|:|   ||..|..|.|.:..:|:
 Frog   293 LLGNLEEICAFQQILVQSLEECTKLPEGQQRVGGCFMSLMPQMKS---LYIAYCANHPSAVNVLT 354

  Fly  1454 EYG---SSFFKPKQMQLQDKLDLASYLLKPVQRMGKYALLLQQLVKACKGVEG---------AAL 1506
            ::.   ..|.:.|.......|.|.:.|.||..|:.||..||::|.:..:....         .|.
 Frog   355 QHSEELGEFMEMKGANSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHPDRPDIQKSMTAF 419

  Fly  1507 QEIAADVEELQRAEEMVKFQLRHGNDLLAMDSLRDCD-VNVKEQGRLLRQNEFLVWQGRGGKKTL 1570
            :.::|..:|:::.:|:   :|:     :..:::|..: .::|..|.::..::.::......:|..
 Frog   420 KNLSAQCQEVRKRKEL---ELQ-----ILTETIRGWEGEDIKTLGTVIYMSQVMIQCAGSEEKNE 476

  Fly  1571 RQVFLFEELVLFSKARRFPDHKNLDIYIYKNSIKTSDIGLTAHTGDSATKFEIWFRKRKPDDTWM 1635
            |.:.||..::|...|     ...:..:||:..|..        ||...||.|             
 Frog   477 RYLLLFPNVLLMLSA-----SPRMSGFIYQGKIPL--------TGMCVTKLE------------- 515

  Fly  1636 LQCMSEDIKNAW-------------------TEEISKLLWKQAKRNREVR-LAEMSSMGIGSKPC 1680
               .:|:.|||:                   .:|....|.||.|....:. ..:..|:...:.|.
 Frog   516 ---DNENHKNAYEIAGNMIERIIVSCNNQQDLQEWVDYLHKQTKYTSLINPTIKPHSVPCHTLPS 577

  Fly  1681 LDIRPSNNQISDRSIPLAQLNKTPKLRHSEPGKGSMRRPNSLISESSL 1728
            ..:.||:.....:.:||     ||.. |:.|.......|:|.||.|.|
 Frog   578 HPVTPSSKHSDCKLMPL-----TPAY-HTLPHLSHHGTPHSTISWSPL 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PuraNP_996016.2 PX_domain 15..>52 CDD:295365
RhoGEF 1353..1532 CDD:279015 45/198 (23%)
PH_puratrophin-1 1524..1663 CDD:270062 27/158 (17%)
PH 1562..1655 CDD:278594 19/111 (17%)
arhgef7XP_012813343.1 CH 21..100 CDD:237981
RhoGEF67_u1 116..162 CDD:293221 13/54 (24%)
SH3_betaPIX 166..219 CDD:212994 6/52 (12%)
RhoGEF 250..427 CDD:238091 42/183 (23%)
PH_Cool_Pix 458..556 CDD:269932 22/126 (17%)
PH 476..556 CDD:278594 21/108 (19%)
RhoGEF67_u2 615..710 CDD:293220 3/5 (60%)
betaPIX_CC 772..858 CDD:293131
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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