Protein Alignment CG42458 and NAB3

DIOPT Version :10

• Sequence 1: NP_996010.2
• Gene: CG42458 / 2768945
• FlyBaseID: FBgn0259935
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: NP_015134.1
• Gene: NAB3 / 855911
• SGDID: S000006111
• Length: 802
• Species: Saccharomyces cerevisiae
• Alignment Length: 477
• Identity: 108/477 - (22%)
• Similarity: 168/477 - (35%)
• Gaps: 118/477 - (24%)

  Fly    20 SRIFVGNLNTFQCSKTDVERMFQIYGRLAGISMHKGYAFVQFTNPFDARNA--CHGED---GKTV 79
            ||:|:|||.....||.|:.|:|..||.:..|::...:.|:||.||...|:|  |..::   ||.:
Yeast   330 SRLFIGNLPLKNVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNFGKKL 394

  Fly    80 LSQTLDVNMVAEPKAHQIGRKRQNVSKTGNDWDYFYDSYCSSAL--LRGGGGAGGGGSNGVRAKK 142
            :.:....|  |.|:... |....|.|.|          :.|||.  .:...|......||...||
Yeast   395 ILEVSSSN--ARPQFDH-GDHGTNSSST----------FISSAKRPFQTESGDMYNDDNGAGYKK 446

  Fly   143 RKR-----------------------LMTNGGGLAVAV-----QQQQQQHHHSAAAVAAAAAAAV 179
            .:|                       ...:|.||...:     :.:..:..:.||.........|
Yeast   447 SRRHTVSCNIFVKRTADRTYAIEVFNRFRDGTGLETDMIFLKPRMELGKLINDAAYNGVWGVVLV 511

  Fly   180 HQQQQ-QVQQQQQQQHHQQQQQQHQQQVAAVAMAAMANLLPQQ--------QLLLHQQNLLSNAA 235
            ::... .||...:....:.:..::....|..|:|...|:...:        :.:.||||:.....
Yeast   512 NKTHNVDVQTFYKGSQGETKFDEYISISADDAVAIFNNIKNNRNNSRPTDYRAMSHQQNIYGAPP 576

  Fly   236 V----ATTVTAAPSSIHWSQYK----QEQQHHPHAHH----PHHQQPFGFQ-----------LKS 277
            :    ...|...|.:.::..|.    |:||..|:.::    |.|.|.:|.|           .::
Yeast   577 LPVPNGPAVGPPPQTNYYQGYSMPPPQQQQQQPYGNYGMPPPSHDQGYGSQPPIPMNQSYGRYQT 641

  Fly   278 SV--------------AVQATTSPQNAKSAIIANQTALG--EPYPVGAAAFAAHQQQHQHQQQHQ 326
            |:              ..||...||......:..|..|.  :..|....:......|.|.||.|.
Yeast   642 SIPPPPPQQQIPQGYGRYQAGPPPQPPSQTPMDQQQLLSAIQNLPPNVVSNLLSMAQQQQQQPHA 706

  Fly   327 QPLLQPLTLALSPQQPQPHQ----------AATPLQLHSQLMQQ------------HQHQQQQQQ 369
            |..|..|..::..|.||..|          :::|..:.:....|            ||....|||
Yeast   707 QQQLVGLIQSMQGQAPQQQQQQLGGYSSMNSSSPPPMSTNYNGQNISAKPSAPPMSHQPPPPQQQ 771

  Fly   370 QQQQQQQQHNQQQQHAQEQLSL 391
            ||||||||..|||.......||
Yeast   772 QQQQQQQQQQQQQPAGNNVQSL 793

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42458	NP_996010.2	RRM_hnRNPC_like	20..87	CDD:409778	24/71 (34%)
NAB3	NP_015134.1	RRM_Nab3p	331..401	CDD:240788	23/69 (33%)