Sequence 1: | NP_996010.2 | Gene: | CG42458 / 2768945 | FlyBaseID: | FBgn0259935 | Length: | 711 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_015134.1 | Gene: | NAB3 / 855911 | SGDID: | S000006111 | Length: | 802 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 477 | Identity: | 108/477 - (22%) |
---|---|---|---|
Similarity: | 168/477 - (35%) | Gaps: | 118/477 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 SRIFVGNLNTFQCSKTDVERMFQIYGRLAGISMHKGYAFVQFTNPFDARNA--CHGED---GKTV 79
Fly 80 LSQTLDVNMVAEPKAHQIGRKRQNVSKTGNDWDYFYDSYCSSAL--LRGGGGAGGGGSNGVRAKK 142
Fly 143 RKR-----------------------LMTNGGGLAVAV-----QQQQQQHHHSAAAVAAAAAAAV 179
Fly 180 HQQQQ-QVQQQQQQQHHQQQQQQHQQQVAAVAMAAMANLLPQQ--------QLLLHQQNLLSNAA 235
Fly 236 V----ATTVTAAPSSIHWSQYK----QEQQHHPHAHH----PHHQQPFGFQ-----------LKS 277
Fly 278 SV--------------AVQATTSPQNAKSAIIANQTALG--EPYPVGAAAFAAHQQQHQHQQQHQ 326
Fly 327 QPLLQPLTLALSPQQPQPHQ----------AATPLQLHSQLMQQ------------HQHQQQQQQ 369
Fly 370 QQQQQQQQHNQQQQHAQEQLSL 391 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42458 | NP_996010.2 | RRM | <11..>89 | CDD:223796 | 25/73 (34%) |
RRM_hnRNPC_like | 20..87 | CDD:240787 | 24/71 (34%) | ||
NAB3 | NP_015134.1 | RRM | <295..>439 | CDD:223796 | 35/121 (29%) |
RRM_Nab3p | 331..401 | CDD:240788 | 23/69 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 44 | 1.000 | Domainoid score | I3160 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 90 | 1.000 | Inparanoid score | I1544 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000671 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR13968 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R8797 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
7 | 7.050 |