DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42458 and ralyl

DIOPT Version :10

Sequence 1:NP_996010.2 Gene:CG42458 / 2768945 FlyBaseID:FBgn0259935 Length:711 Species:Drosophila melanogaster
Sequence 2:XP_012820330.1 Gene:ralyl / 779659 XenbaseID:XB-GENE-5767075 Length:333 Species:Xenopus tropicalis


Alignment Length:281 Identity:73/281 - (25%)
Similarity:123/281 - (43%) Gaps:77/281 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKLSNQTNSQDPQAVNSRIFVGNLNTFQCSKTDVERMFQIYGRLAGISMHKGYAFVQFTNPFDAR 68
            ::.||.||..||:::|||:|:|||||....|.|:|.:|..||::.|.|:||||||||:.:...||
 Frog     5 TQTSNVTNKNDPKSINSRVFIGNLNTGIVKKADIEAIFAKYGKIVGCSVHKGYAFVQYISERHAR 69

  Fly    69 NACHGEDGKTVLSQTLDVNMVAEPKAH--QIGRKR---QNVSKTGNDWDYFYDSYCSSAL----- 123
            .|..||:.:.:..|.||:||..|||.:  ::|.||   ...|....|:||:.|.:.:...     
 Frog    70 AAVTGENSRIIGGQPLDINMAGEPKPYRPKLGTKRPLSTLYSAYDFDYDYYRDDFYNRLFDYGHG 134

  Fly   124 ------------------------------LRGGGGAGGGGSNGVRAKKRK-----------RLM 147
                                          |:||..:..|||:...:|.:.           ::.
 Frog   135 RVPPPPRAAIPLKRPRMSVPTTRRGKGVFSLKGGSRSASGGSSSSGSKLKSDELQTIKKELTQIK 199

  Fly   148 TNGGGLAVAVQQ-QQQQHHHSAAAV--------AAAAAAAVHQQQQQV----------------- 186
            |....|...::: ::||...:..|:        :....|.|.::.||:                 
 Frog   200 TKIDSLLGRLEKIEKQQKAEAGDALLRLWIMGHSYKKRALVKERGQQMDFSRDSLEIRWLGIKGA 264

  Fly   187 QQQQQQQHHQQQQQQHQQQVA 207
            |::|.:.|....|::.:.:.|
 Frog   265 QKKQTEDHTDSVQEECKSETA 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42458NP_996010.2 RRM_hnRNPC_like 20..87 CDD:409778 32/66 (48%)
ralylXP_012820330.1 RRM_SF 15..97 CDD:473069 40/81 (49%)

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