Protein Alignment CG42458 and Srsf1

DIOPT Version :9

• Sequence 1: NP_996010.2
• Gene: CG42458 / 2768945
• FlyBaseID: FBgn0259935
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: NP_001103022.1
• Gene: Srsf1 / 689890
• RGDID: 1587490
• Length: 248
• Species: Rattus norvegicus
• Alignment Length: 148
• Identity: 41/148 - (27%)
• Similarity: 58/148 - (39%)
• Gaps: 55/148 - (37%)

  Fly    21 RIFVGNLNTFQCSKTDVERMFQIYGRLAGISM--HKG---YAFVQFTNPFDARNACHGEDGKTVL 80
            ||:||||.....:| |:|.:|..||.:..|.:  .:|   :|||:|.:|.||.:|.:|.||
  Rat    17 RIYVGNLPPDIRTK-DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG---- 76

  Fly    81 SQTLDVNMVAEPKAHQIGRKRQNVSKTGNDWDYFYDSY--------CSSALLRGGGGAGGGGSNG 137
                                            |.||.|        ......|||||.||||:..
  Rat    77 --------------------------------YDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPR 109

  Fly   138 VR-----AKKRKRLMTNG 150
            .|     .:...|::.:|
  Rat   110 GRYGPPSRRSENRVVVSG 127

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42458	NP_996010.2	RRM	<11..>89	CDD:223796	25/72 (35%)
		RRM_hnRNPC_like	20..87	CDD:240787	25/70 (36%)
Srsf1	NP_001103022.1	RRM1_SRSF1	12..90	CDD:410010	29/109 (27%)
		RRM2_SRSF1	113..196	CDD:410160	2/15 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1315388at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010