DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG42458 and srsf4

DIOPT Version :9

Sequence 1:	NP_996010.2	Gene:	CG42458 / 2768945	FlyBaseID:	FBgn0259935	Length:	711	Species:	Drosophila melanogaster
Sequence 2:	NP_955868.1	Gene:	srsf4 / 321872	ZFINID:	ZDB-GENE-030131-591	Length:	366	Species:	Danio rerio

Alignment Length:	128	Identity:	41/128 - (32%)
Similarity:	68/128 - (53%)	Gaps:	19/128 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    20 SRIFVGNLNTFQCSKTDVERMFQIYGRLAGISMHKGYAFVQFTNPFDARNACHGEDGKTVLSQTL 84
            ||::||.| :::..:.||||.|:.||::..:.:..||.||:|.:|.||.:|.:..:||.:..:.:
Zfish     2 SRVYVGKL-SYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDLCGKRV 65

  Fly    85 DVNMVAEPKAHQIGRKRQNVSKTGNDWDYFYDSYCSSALLRGGGGAGGGGSNGVRAKKRKRLM 147
            .|.       |.||::|...:::|.          |:...||||| |||...|...:...||:
Zfish    66 IVE-------HTIGQRRDGGNRSGR----------SNRYGRGGGG-GGGDRYGPPTRTDYRLI 110

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG42458	NP_996010.2	RRM	<11..>89	CDD:223796	24/68 (35%)
CG42458	NP_996010.2	RRM_hnRNPC_like	20..87	CDD:240787	23/66 (35%)
srsf4	NP_955868.1	RRM1_SRSF4_like	3..72	CDD:240783	24/76 (32%)
srsf4	NP_955868.1	RRM2_SRSF4_like	107..178	CDD:241044	2/4 (50%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1315388at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	2.010