Protein Alignment CG42458 and Hnrnpc

DIOPT Version :9

• Sequence 1: NP_996010.2
• Gene: CG42458 / 2768945
• FlyBaseID: FBgn0259935
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: NP_001264529.1
• Gene: Hnrnpc / 290046
• RGDID: 1309982
• Length: 313
• Species: Rattus norvegicus
• Alignment Length: 261
• Identity: 73/261 - (27%)
• Similarity: 118/261 - (45%)
• Gaps: 52/261 - (19%)

  Fly     7 SNQTNSQDPQAVNSRIFVGNLNTFQCSKTDVERMFQIYGRLAGISMHKGYAFVQFTNPFDARNAC 71
            ||.||..||:::|||:|:|||||....|:|||.:|..||::.|.|:|||:||||:.|..:||.|.
  Rat     3 SNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAV 67

  Fly    72 HGEDGKTVLSQTLDVNMVAEPKAH--QIGRKRQNVSKTGN-----------------DWDY---F 114
            .||||:.:..|.||:|:.||||.:  :.|.||......|:                 |:|:   :
  Rat    68 AGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDY 132

  Fly   115 YDSYCS-----------------SALLRGGGGAGGGGSNGVRAKKRKRLMTNGGGL-----AVAV 157
            ||...|                 |...|..|.....|.:|..:|..:|..::..|.     ..|:
  Rat   133 YDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQAI 197

  Fly   158 QQQQQQHHHSAAAVAAAAAAAVHQQQQQ--------VQQQQQQQHHQQQQQQHQQQVAAVAMAAM 214
            :::..|......::..:......:|.:|        |:.:.::...:|.....::....|.|.:.
  Rat   198 KKELTQIKQKVDSLLESLEKIEKEQSKQADLSFSSPVEMKNEKSEEEQSSASVKKDETNVKMESE 262

  Fly   215 A 215
            |
  Rat   263 A 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42458	NP_996010.2	RRM	<11..>89	CDD:223796	40/77 (52%)
		RRM_hnRNPC_like	20..87	CDD:240787	35/66 (53%)
Hnrnpc	NP_001264529.1	RRM_hnRNPC	10..93	CDD:410015	43/82 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	74	1.000	Domainoid score	I8902
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000671
OrthoInspector	1	1.000	-	-		otm45524
orthoMCL	1	0.900	-	-		OOG6_106780
Panther	1	1.100	-	-	LDO	PTHR13968
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X853
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.910