Protein Alignment CG42458 and nab3

DIOPT Version :9

• Sequence 1: NP_996010.2
• Gene: CG42458 / 2768945
• FlyBaseID: FBgn0259935
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: NP_593002.1
• Gene: nab3 / 2543638
• PomBaseID: SPAC3H8.09c
• Length: 738
• Species: Schizosaccharomyces pombe
• Alignment Length: 153
• Identity: 47/153 - (30%)
• Similarity: 74/153 - (48%)
• Gaps: 25/153 - (16%)

  Fly     4 SKLSNQTNSQDPQAVNSRIFVGNLNTFQCSKTDVERMFQIYGRLAGISMHKGYAFVQFTNPFDAR 68
            |.:||....|.|.|  ||:|:|:|||...||.::.::|:|||.||.|.:...|.||||....|..
pombe   349 SIMSNWYPGQFPSA--SRLFLGHLNTKSLSKRNLWKVFKIYGPLAQIVLKANYGFVQFFTNEDCA 411

  Fly    69 NACHGEDGKTVLSQT--LDVNMVAEPKAHQIG--RKRQNVSKTGNDWDYFYDS--YCSSALLRGG 127
            .|.:.|.|..|..|.  |:::.:.:...:||.  :|..:|:|: |.:.....:  |.:|:
pombe   412 RALNAEQGNFVRGQKLHLEISKIQKKYQNQIENMKKGSHVTKS-NQYSEMIGNLPYPTSS----- 470

  Fly   128 GGAGGGGSNGVRAKKRKRLMTNG 150
                       |.:.|..||:.|
pombe   471 -----------RKRTRSPLMSKG 482

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42458	NP_996010.2	RRM	<11..>89	CDD:223796	31/79 (39%)
		RRM_hnRNPC_like	20..87	CDD:240787	28/68 (41%)
nab3	NP_593002.1	RRM	256..503	CDD:223796	47/153 (31%)
		RRM_Nab3p	364..434	CDD:240788	27/69 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	49	1.000	Domainoid score	I3452
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000671
OrthoInspector	1	1.000	-	-		oto101324
orthoMCL	1	0.900	-	-		OOG6_106780
Panther	1	1.100	-	-	LDO	PTHR13968
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R8797
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	6.030