Protein Alignment CG42458 and rsp-2

DIOPT Version :9

• Sequence 1: NP_996010.2
• Gene: CG42458 / 2768945
• FlyBaseID: FBgn0259935
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: NP_496441.1
• Gene: rsp-2 / 174747
• WormBaseID: WBGene00004699
• Length: 281
• Species: Caenorhabditis elegans
• Alignment Length: 113
• Identity: 30/113 - (26%)
• Similarity: 53/113 - (46%)
• Gaps: 17/113 - (15%)

  Fly    21 RIFVGNLNTFQCSKTDVERMFQIYGRLAGISMHKGYAFVQFTNPFDARNACHGEDGKTVLSQTLD 85
            |:::|.|.. :.|..|||..|:.||:|:.:.|..|:.||.|.:..||.:|.|..:||.:..:
 Worm     3 RVYIGRLPN-RASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCGE--- 63

  Fly    86 VNMVAEPKAHQIG----------RKRQNVSKTGNDWDYF--YDSYCSS 121
             .::.|....::|          |.|:...:.|.:..:.  |...||:
 Worm    64 -RVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCST 110

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42458	NP_996010.2	RRM	<11..>89	CDD:223796	22/67 (33%)
		RRM_hnRNPC_like	20..87	CDD:240787	22/65 (34%)
rsp-2	NP_496441.1	RRM_SF	112..184	CDD:302621
		RRM1_SRSF4_like	3..71	CDD:240783	23/72 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1315388at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010