Protein Alignment CG42458 and rsp-5

DIOPT Version :9

• Sequence 1: NP_996010.2
• Gene: CG42458 / 2768945
• FlyBaseID: FBgn0259935
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: NP_495307.3
• Gene: rsp-5 / 174073
• WormBaseID: WBGene00004702
• Length: 208
• Species: Caenorhabditis elegans
• Alignment Length: 92
• Identity: 34/92 - (36%)
• Similarity: 48/92 - (52%)
• Gaps: 16/92 - (17%)

  Fly    21 RIFVGNLNTFQCSKTDVERMFQIYGRLAGISMHKGYAFVQFTNPFDARNACHGEDGKTV--LSQT 83
            |:::|.: .:...:.||||..:.||::..|||..|:|||.|.:..||.:|||..||||:  .|..
 Worm     3 RLYLGKI-PYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMR 66

  Fly    84 LDVNMVAEPKAHQIGRKRQNVSKTGND 110
            |.|.|..       |:.|      |||
 Worm    67 LVVEMAR-------GKPR------GND 80

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42458	NP_996010.2	RRM	<11..>89	CDD:223796	28/69 (41%)
		RRM_hnRNPC_like	20..87	CDD:240787	27/67 (40%)
rsp-5	NP_495307.3	RRM	<3..>77	CDD:223796	30/81 (37%)
		RRM_SF	3..74	CDD:302621	29/78 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1315388at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010