DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-5 and RPN1

DIOPT Version :9

Sequence 1:NP_995679.1 Gene:rho-5 / 2768944 FlyBaseID:FBgn0041723 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_002941.1 Gene:RPN1 / 6184 HGNCID:10381 Length:607 Species:Homo sapiens


Alignment Length:99 Identity:21/99 - (21%)
Similarity:38/99 - (38%) Gaps:28/99 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1328 VTFTEKALV----SHILYPTAPRKTSAQQWQEVEYSRSFNHLSNYSDRIKKSIGNISKLKQVFT- 1387
            :|.:||..|    :|..|...|.||     |.:....:..::.:|:     .:||.::.:.:.. 
Human   146 ITQSEKQFVVFEGNHYFYSPYPTKT-----QTMRVKLASRNVESYT-----KLGNPTRSEDLLDY 200

  Fly  1388 SPIR----FSNKNNHSNLMTELTSVHSENKQKYL 1417
            .|.|    :|.         :...||.||...:|
Human   201 GPFRDVPAYSQ---------DTFKVHYENNSPFL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-5NP_995679.1 Rhomboid 1090..1225 CDD:279958
RPN1NP_002941.1 Ribophorin_I 32..457 CDD:398338 21/99 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2291
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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